Jena Picornavirus Page

Genus Enterovirus

Genus Enterovirus presently comprises 15 species:

Enterovirus A, 25 types

Enterovirus B, 63 types

Enterovirus C, 23 types

Enterovirus D, 5 types

Enterovirus E, 5 types

Enterovirus F, 7 types

Enterovirus G, 20 types

Enterovirus H, 1 type

Enterovirus I, 2 types

Enterovirus J, 6 types

Enterovirus K, 2 types

Enterovirus L, 1 type

Rhinovirus A, 80 types

Rhinovirus B, 32 types

Rhinovirus C, 57 types

Genome layout:

VPg-5'UTR^IRES[1A-1B-1C-1D/2A^pro-2B-2C^hel/3A- 3B^VPg-3C^pro-3D^pol]3'UTR-poly(A)

exception Enterovirus K: VPg-5'UTR^IRES[1A-1B-1C-1D/2A1^pro-2A2^pro-2B-2C^hel/3A- 3B^VPg-3C^pro-3D^pol]3'UTR-poly(A)

This compilation is not comprehensive. There are more than 84,500 GenBank entries with search term "[organism] enterovirus" (as of 21 October 2018) !

Species	Type	Strain	Length	Acc. No.	Reference
*Enterovirus A*	CVA2	coxsackievirus A2 strain Fleetwood (Delaware/47)	7398 nt	AY421760	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA3	coxsackievirus A3 strain Olson (New York/48)	7395 nt	AY421761	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA4	coxsackievirus A4 strain High Point (North Carolina/50)	7434 nt	AY421762	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA5	coxsackievirus A5 strain Swartz (New York/50)	7400 nt	AY421763	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA6	coxsackievirus A6 strain Gdula	7434 nt	AY421764	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA7	coxsackievirus A7 strain Parker	7404 nt	AY421765	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA8	coxsackievirus A8 strain Donovan (New York/49)	7396 nt	AY421766	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA10	coxsackievirus A10 strain Kowalik (New York/50)	7409 nt	AY421767	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA12	coxsackievirus A12 strain Texas 12 (Texas/48)	7404 nt	AY421768	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA14	coxsackievirus A14 strain G-14 (South Africa/50)	7415 nt	AY421769	Oberste et al. 2004. Complete genome sequences of all members of the species Human Enterovirus A. J. Gen. Virol. 85 (PT 6):1597-1607.
	CVA16	coxsackievirus A16 strain G-10 (South Africa/51)	7413 nt	U05876	Pöyry et al. 1994. Molecular analysis of coxsackievirus A16 reveals a new genetic group of enteroviruses. Virology 202 (2):982-987.
	EV-A71	enterovirus A71 strain BrCr	7415 nt	U22521	Brown & Pallansch. 1995. Complete nucleotide sequence of enterovirus 71 is distinct from poliovirus. Virus Res. 39 (2-3):195-205.
	EV-A76	enterovirus A76 strain FRA91-10369 (France/1991)	7438 nt	AY697458	Oberste et al. 2005. Enterovirus 76, 89, 90 and 91 represent a novel group within the species Human enterovirus A. J. Gen. Virol. 86 (PT 2):445-451.
	EV-A89	enterovirus A89 strain BAN00-10359 (Bangladesh/2000)	7429 nt	AY697459	Oberste et al. 2005. Enterovirus 76, 89, 90 and 91 represent a novel group within the species Human enterovirus A. J. Gen. Virol. 86 (PT 2):445-451.
	EV-A90	enterovirus A90 strain BAN99-10399 (Bangladesh/1999)	7425 nt	AY697460	Oberste et al. 2005. Enterovirus 76, 89, 90 and 91 represent a novel group within the species Human enterovirus A. J. Gen. Virol. 86 (PT 2):445-451.
	EV-A91	enterovirus A91 strain BAN00-10406 (Bangladesh/2000)	7427 nt	AY697461	Oberste et al. 2005. Enterovirus 76, 89, 90 and 91 represent a novel group within the species Human enterovirus A. J. Gen. Virol. 86 (PT 2):445-451.
	EV-A92	enterovirus A92 strain USA/GA99/RJg-7 (Georgia/1999)	7379 nt	EF667344	Oberste et al. 2008. The complete genome sequences for three simian enteroviruses isolated from captive primates. Arch. Virol. 153 (11):2117-2122.
	EV-A114	enterovirus A114 strain V13-0285/IND/2013	7317 nt	KU355876	Deshpande et al. 2016. Genomic characterization of two new enterovirus types, EV-A114 and EV-A121. J. Med. Microbiol. 65 (12):1465-1471.
	EV-A119	enterovirus A119 strain hu/09C13CMR (Cameroon)	1863 nt	KC787153	Ayukekbong et al. 2013. Shift ofEnterovirus species among children in Cameroon - Identification of a new enterovirus, EV-A119. J. Clin. Virol. 58 (1):227-232.
	EV-A120	enterovirus A120 strain MAD-2741-11 (Madagascar)	7407 nt	LK021688	Razafindratsimandresy et al. 2014. First full genome sequence of a human enterovirus A120, isolated in Madagascar. Genome Announc. 2 (3):e00568-14.
	EV-A121	enterovirus A121 strain V13-0682/IND/2013 (Madagascar)	7317 nt	KU355876	Deshpande et al. 2016. Genomic characterization of two new enterovirus types, EV-A114 and EV-A121. J. Med. Microbiol. 65 (12):1465-1471.
	SV19	simian virus 19 strain M19s	7373 nt	AF326754	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
	SV43	simian virus 43 strain OM112t (P12)	7348 nt	AF326761	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
	SV46	simian virus 46 strain OM22 (P15)	7348 nt	AF326764	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
	BabEV-A13	baboon enterovirus A13 strain A13	7389 nt	AF326750	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
*Enterovirus B*	CVB1	coxsackievirus B1 strain Japan	7389 nt	M16560	Zell et al., unpublished.
	CVB2	coxsackievirus B2 strain Ohio-1 (Ohio/US/47)	7403 nt	AF081485	Iizuka et al. 1987. Complete nucleotide sequences of the genome of coxsackievirus B1. J. Virol. 156 (1):64-73.
	CVB3	coxsackievirus B3 strain Nancy (Connecticut/US/49) *[prototype strain of Enterovirus B]*	7399 nt	M88483	Curated consensus sequence based on: Lindberg et al. 1987. Genome of coxsackievirus B3. Virology 156 (1):50-63. Klump et al. 1990. Complete nucleotide sequence of infectious Coxsackievirus B3 cDNA: two initial 5' uridine residues are regained during plus-strand RNA synthesis. J. Virol. 64 (4):1573-1583. Tracy et al. 1992. Coxsackievirus B3 from an infectious cDNA copy of the genome is cardiovirulent in mice. Arch. Virol. 122 (3-4):399-409.
	CVB4	coxsackievirus B4 strain JVB (Benschoten) (New York/US/51)	7395 nt	X05690	Jenkins et al. 1987. The complete nucleotide sequence of coxsackievirus B4 and its comparison to other members of the Picornaviridae. J. Gen. Virol. 68 (PT 7):1836-1848.
	CVB5	coxsackievirus B5 strain Faulkner (Kentucky/US/52)	7400 nt	AF114383	Lindberg & Polacek. 2000. Molecular analysis of the prototype strain coxsackievirus B5 genome. Arch. Virol. 145 (2):205-221.
	CVB6	coxsackievirus B6 strain Schmitt (1-15-21) (Philippines/53)	7398 nt	AF039205	R. Zell, unpublished.
	CVA9	coxsackievirus A9 strain Griggs	7452 nt	D00627	Chang et al. 1989. The nucleotide sequence of coxsackievirus A9; implications for receptor binding and enterovirus classification. J. Gen. Virol. 70 (PT 12):3269-3280.
	E1	echovirus 1 strain Farouk [ATCC VR-1038] (Egypt/51)	7397 nt	AF029859	J.M. Bergelson, unpublished.
	E1	echovirus 1 strain Bryson (Ohio) [formerly echovirus 8]	2645 nt (P1)	AF250874	Ohman et al. 2001. Echoviruses 1 and 8 are closely related genetically, and bind to similar determinants within the VLA-2 I domain. Virus Res. 76 (1):1-8.
	E2	echovirus 2 strain Cornelis (Connecticut/US/51)	7435 nt	AY302545	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E3	echovirus 3 strain Morrisey (Connecticut/US/51)	7428 nt	AY302553	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E4	echovirus 4 strain Pesacek (Connecticut/US/51)	7394 nt	AY302557	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E5	echovirus 5 strain Noyce (Maine/US/54)	7433 nt	AF083069	Lindberg et al. 1999. Enterovirus 5: infectious transcripts and complete nucleotide sequence from uncloned cDNA. Virus Res. 59 (1):75-87.
	E6	echovirus 6 strain D'Amori (Rhode Island/US/55)	7418 nt	AY302558	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E7	echovirus 7 strain Wallace (Ohio/US)	7427 nt	AY302559	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E9	echovirus 9 strain Hill (Ohio/US/53)	7420 nt	X84981	Zimmermann et al. 1995. Complete nucleotide sequence and biological properties of an infectious clone of prototype echovirus 9. Virus Res. 39 (2-3):311-319.
	E11	echovirus 11 strain Gregory (Ohio/US)	7438 nt	X80059	Dahllund et al. 1995. The genome of echovirus 11. Virus Res. 35 (2):215-222.
	E12	echovirus 12 strain Travis (Philippines/53)	7438 nt	X79047	Kraus et al. 1995. Infectious cDNA clones of echovirus 12 and a variant resistant against the uncoating inhibitor rhodanine differ in seven amino acids. J. Virol. 69 (9):5853-5858.
	E13	echovirus 13 strain Del Carmen (Philippines/53)	7410 nt	AY302539	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E14	echovirus 14 strain Tow (Rhode Island/US/54)	7450 nt	AY302540	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E15	echovirus 15 strain Ch 96-51 (Charleston) (West Virginia/US/51)	7437 nt	AY302541	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E16	echovirus 16 strain Harrington (Massachusetts/US/51)	7437 nt	AY302542	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E17	echovirus 17 strain CHHE-29 (Mexico City)	7416 nt	AY302543	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E18	echovirus 18 strain Metcalf (Ohio/US)	7410 nt	AF317694	Andersson et al. 2002. Molecular analysis of the echovirus 18 prototype: evidence of interserotypic recombination with echovirus 9. Virus Res. 85 (1):71-83.
	E19	echovirus 19 strain Burke (Ohio/US)	7433 nt	AY302544	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E20	echovirus 20 strain JV-1 (Washington DC/US/55)	7394 nt	AY302546	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E21	echovirus 21 strain Farina (E26D) (Massachusetts/US/50)	7426 nt	AY302547	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E24	echovirus 24 strain DeCamp (Ohio/US/56)	7433 nt	AY302548	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E25	echovirus 25 strain JV-4 (Washington DC/US/57)	7426 nt	AY302549	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E26	echovirus 26 strain Coronel (11-3-6) (Philippines/53)	7424 nt	AY302550	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E27	echovirus 27 strain Bacon (1-36-4) (Philippines/53)	7412 nt	AY302551	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E29	echovirus 29 strain JV-10 (Washington DC/US/55)	7427 nt	AY302552	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E30	echovirus 30 strain Bastianni (New York/US/58)	7440 nt	AF162711	R. Zell, unpublished.
	E31	echovirus 31 strain Caldwell (Kansas/US/55)	7432 nt	AY302554	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E32	echovirus 32 strain PR-10 (Puerto Rico)	7420 nt	AY302555	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	E33	echovirus 33 strain Toluca-3 (Mexico/59)	7394 nt	AY302556	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	EV-B69	enterovirus B69 strain Toluca-1 (Mexico/59)	7411 nt	AY302560	Oberste et al. 2004. Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol. 78 (2):855-867.
	EV-B73	enterovirus B73 strain CA-55-1988 (California/US)	7411 nt	AF241359	Oberste et al. 2001. Molecular identification of new picornaviruses and characterization of a proposed enterovirus 73 serotype. J. Gen. Virol. 82 (PT 2):409-416.
	EV-B73	enterovirus B73 strain CA-55-1988 (California/US)	7411 nt	AF241360	Oberste et al. 2001. Molecular identification of new picornaviruses and characterization of a proposed enterovirus 73 serotype. J. Gen. Virol. 82 (PT 2):409-416.
	EV-B74	enterovirus B74 strain USA/CA75-10213 (California/US)	7410 nt	AY556057	Oberste et al. 2004. Molecular identification and characterization of two proposed new enterovirus serotypes, EV74 and EV75. J. Gen. Virol. 85 (PT 11):3205-3212.
	EV-B75	enterovirus B75 strain USA/OK85-10362 (Oklahoma/US)	7429 nt	AY556070	Oberste et al. 2004. Molecular identification and characterization of two proposed new enterovirus serotypes, EV74 and EV75. J. Gen. Virol. 85 (PT 11):3205-3212.
	EV-B77	enterovirus B77 strain CF496-99	7415 nt	AJ493062	Bailly et al. 2004. Isolation and identification of an enterovirus 77 recovered from a refugee child from Kosovo, and characterization of the complete virus genome. Virus Res. 99 (2):147-155.
	EV-B78	enterovirus B78 strain Agius; W137-126/99	2574 nt (P1)	AY208120	Norder et al. 2003. Sequencing of 'untypeable' enteroviruses reveals two new types, EV-77 and EV-78, within human enterovirus type B and substitutions in the BC loop of the VP1 protein for known types. J. Gen. Virol. 84 (PT 4):827-836.
	EV-B79	enterovirus B79 strain USA/CA79-10384 (California/79)	7430 nt	AY843297	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B80	enterovirus B80 strain USA/CA67-10387 (California/67)	7428 nt	AY843298	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B81	enterovirus B81 strain USA/CA68-10389 (California/68)	7415 nt	AY843299	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B82	enterovirus B82 strain USA/CA64-10390 (California/64)	7427 nt	AY843300	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B83	enterovirus B83 strain USA/CA76-10392 (California/76)	7394 nt	AY843301	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B84	enterovirus B84 strain CIV2003-10603	7394 nt	DQ902712	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B85	enterovirus B85 strain BAN00-10353 (Bangladesh/2000)	7418 nt	AY843303	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B86	enterovirus B86 strain BAN00-10354 (Bangladesh/2000)	7400 nt	AY843304	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B87	enterovirus B87 strain BAN00-10396 (Bangladesh/2000)	7422 nt	AY843305	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B88	enterovirus B88 strain BAN01-10398 (Bangladesh/2001)	7433 nt	AY843306	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B93	enterovirus B93 strain 38-03 (DR Congo)	7336 nt	KM273013	Junttila et al. 2014. Complete coding regions of the prototypes enterovirus B93 and C95: Phylogenetic analyses of the P1 and P3 regions of EV-B and EV-C strains. J. Med. Virol. 87 (3):485-497.
	EV-B97	enterovirus B97 strain BAN99-10355 (Bangladesh/1999)	7413 nt	AY843307	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B98	enterovirus B98 strain T92-1499	7422 nt	AB426608	Yamashita et al. 2010. Molecular identification of enteroviruses including two new types, (EV-98 and EV107) isolated from Japanese travellers from Asian countries. J. Gen. Virol. 91 (PT 4):1063-1066.
	EV-B100	enterovirus B100 strain BAN2000-10500 (Bangladesh/2000)	7421 nt	DQ902713	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B101	enterovirus B101 strain CIV03-10361	7445 nt	AY843308	Oberste et al. 2007. Molecular identification of 13 new enterovirus types, EV-79-88, EV-97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128 (1-2):34-42.
	EV-B106	enterovirus B106 strain 148/YN/CHN/12 (China/2012)	7420 nt	KF990476	Tang et al. 2014. Complete genome characterization of a novel enterovirus type EV-B106 isolated in China, 2012. Sci. Rep. 4:4255.
	EV-B107	enterovirus B107 strain T94-0349	7423 nt	AB426609	Yamashita et al. 2010. Molecular identification of enteroviruses including two new types, (EV-98 and EV107) isolated from Japanese travellers from Asian countries. J. Gen. Virol. 91 (PT 4):1063-1066.
	EV-B110	enterovirus B110 [chimpanzee enterovirus CPS-2011] strain LM1861 (chimpanzee/Cameroon/2006)	430 nt (par 5' UTR)	JF416928	Harvala et al. 2011. Detection and genetic characterization of enteroviruses circulating among wild populations of chimpanzees in Cameroon: Relationship with human and simian enteroviruses. J. Virol. 85 (9):4480-4486.
			404 nt (VP4/VP2)	JF416931	Harvala et al. 2011. Detection and genetic characterization of enteroviruses circulating among wild populations of chimpanzees in Cameroon: Relationship with human and simian enteroviruses. J. Virol. 85 (9):4480-4486.
			976 nt (VP1)	JF416934	Harvala et al. 2011. Detection and genetic characterization of enteroviruses circulating among wild populations of chimpanzees in Cameroon: Relationship with human and simian enteroviruses. J. Virol. 85 (9):4480-4486.
			547 nt (par 3D)	JF416937	Harvala et al. 2011. Detection and genetic characterization of enteroviruses circulating among wild populations of chimpanzees in Cameroon: Relationship with human and simian enteroviruses. J. Virol. 85 (9):4480-4486.
EV-B111	enterovirus B111 strain Q0011/XZ/CHN/2000	7428 nt	KF312882	Zhang et al. 2014. Molecular typing and characterization of a new serotype of human enterovirus (EV-B111) identified in China. Virus Res. 183:75-80.
EV-B112	enterovirus B112 strain GAB130 (chimpanzee/Gabon)	6545 nt	KJ418244	Mombo et al., unpublished.
EV-B113	enterovirus B113 strain GAB653 (mandrill/Gabon)	6224 nt	KJ701249	Mombo et al., unpublished.
SA5	simian agent 5 strain B165 (vervet monkey)	7378 nt	AF326751	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
*Enterovirus C*	PV1	poliovirus 1 strain Mahoney (Ohio/US/41) *[prototype strain of Enterovirus C]*	7440 nt	V01149	Curated consensus sequence based on: Kitamura & Wimmer. 1980. Sequence of 1060 3'-terminal nucleotides of poliovirus RNA as determined by a modification of the dideoxynucleotide method. PNAS 77 (6):3196-3200. Kitamura et al. 1980. The genome-linked protein of picornaviruses. VII. Genetic mapping of poliovirus VPg by protein and RNA sequence studies. Cell 21 (1):295-302. Kitamura et al. 1981. Primary structure, gene organization and polypeptide expression of poliovirus RNA. Nature 291 (5816):547-553. Racaniello & Baltimore. 1981. Molecular cloning of poliovirus cDNA and determination of the complete nucleotide sequence of the viral genome. PNAS 78 (8):4887-4891. Emini et al. 1982. Carboxyterminal analysis of poliovirus proteins: termination of poliovirus RNA translation and location of unique poliovirus polyprotein cleavage sites. J. Virol. 42 (1):194-199. Dorner et al. 1982. Identification of the initiation site of poliovirus polyprotein synthesis. J. Virol. 42 (3):1017-1028.
	PV1		7440 nt	NC_002058	Curated consensus sequence based on: Kitamura & Wimmer. 1980. Sequence of 1060 3'-terminal nucleotides of poliovirus RNA as determined by a modification of the dideoxynucleotide method. PNAS 77 (6):3196-3200. Kitamura et al. 1980. The genome-linked protein of picornaviruses. VII. Genetic mapping of poliovirus VPg by protein and RNA sequence studies. Cell 21 (1):295-302. Kitamura et al. 1981. Primary structure, gene organization and polypeptide expression of poliovirus RNA. Nature 291 (5816):547-553. Racaniello & Baltimore. 1981. Molecular cloning of poliovirus cDNA and determination of the complete nucleotide sequence of the viral genome. PNAS 78 (8):4887-4891. Emini et al. 1982. Carboxyterminal analysis of poliovirus proteins: termination of poliovirus RNA translation and location of unique poliovirus polyprotein cleavage sites. J. Virol. 42 (1):194-199. Dorner et al. 1982. Identification of the initiation site of poliovirus polyprotein synthesis. J. Virol. 42 (3):1017-1028.
	PV1	poliovirus 1 strain Sabin (LSc, 2ab)	7441 nt	V01150	Curated consensus sequence based on: Emini et al. 1982. Carboxyterminal analysis of poliovirus proteins: termination of poliovirus RNA translation and location of unique poliovirus polyprotein cleavage sites. J. Virol. 42 (1):194-199. Dorner et al. 1982. Identification of the initiation site of poliovirus polyprotein synthesis. J. Virol. 42 (3):1017-1028. Nomoto et al. 1982. Complete nucleotide sequence of the attenuated poliovirus Sabin 1 strain genome. PNAS 79 (19):5793-5797.
	PV2	poliovirus 2 strain Lansing (Michigan/US/37)	7440 nt	M12197	La Monica et al. 1986. Mapping of sequences required for mouse neurovirulence of poliovirus type 2 Lansing. J. Virol. 57 (2):515-525.
	PV2	poliovirus 2 strain Sabin (P712, Ch, 2ab)	7439 nt	X00595	Toyoda et al. 1984. Complete nucleotide sequences of all three poliovirus serotype genomes. Implication for genetic relationship, gene function and antigenic determinants. J. Mol. Biol. 174 (4):561-585.
	PV3	poliovirus 3 strain Leon (California/US/37)	7431 nt	K01392	Stanway et al. 1984. Comparison of the complete nucleotide seuqnces of the genomes of the neurovirulent poliovirus P3/Leon/37 and its attenuated Sabin vaccine derivative P3/Leon 12a1b. PNAS 81 (5):1539-1543.
	PV3	poliovirus 3 strain Sabin (Leon 12a-1-b)	7432 nt	X00925	Stanway et al. 1983. The nucleotide sequence of poliovirus type 3 Leon 12 a1b: Comparison with poliovirus type 1. Nucleic Acids Res. 11 (16):5629-5643.
	CVA1	coxsackievirus A1 strain T.T. (Tompkins) (Coxsackie, New York/US/47)	7397 nt	AF499635	Brown et al. 2003. Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77 (16):8973-8984.
	CVA11	coxsackievirus A11 strain Belgium-1 (Belgium/51)	7453 nt	AF499636	Brown et al. 2003. Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77 (16):8973-8984.
	CVA13	coxsackievirus A13 strain Flores (Mexico/52)	7458 nt	AF499637	Brown et al. 2003. Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77 (16):8973-8984.
	CVA13	coxsackievirus A13 strain G-13 (South Africa/50) [formerly coxsackievirus A18]	7458 nt	AF499640	Brown et al. 2003. Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77 (16):8973-8984.
	CVA17	coxsackievirus A17 strain G12 (South Africa/51)	7457 nt	AF499639	Brown et al. 2003. Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77 (16):8973-8984.
	CVA19	coxsackievirus A19 strain NIH-8663 (Dohi) (Japan/52)	7410 nt	AF499641	Brown et al. 2003. Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77 (16):8973-8984.
	CVA20	coxsackievirus A20 strain IH-35 (New York/US/55)	7436 nt	AF499642	Brown et al. 2003. Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77 (16):8973-8984.
	CVA21	coxsackievirus A21 strain Kuykendall (California/US/52)	7406 nt	AF546702	Brown et al. 2003. Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77 (16):8973-8984.
	CVA22	coxsackievirus A22 strain Chulman (New York/US/55)	7406 nt	AF499643	Brown et al. 2003. Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77 (16):8973-8984.
	CVA24	coxsackievirus A24 strain Joseph	7459 nt	EF026081	Brown et al. 2009. Resolving ambiguities in genetic typing of human enterovirus species C isolates and identification of enterovirus 96, 99 and 102. J. Gen. Virol. 90 (PT 7):1713-1723.
	EV-C95	enterovirus C95 strain 95_T08-083 (Chad/2008)	894 nt (VP1)	JX417822	Sadeuh-Mba et al. 2013. High frequency and diversity of species C enteroviruses in Cameroon and neighboring countries. J. Clin. Microbiol. 51 (3):759-770.
	EV-C96	enterovirus C96 strain BAN00-10499 (Bangladesh/2000)	7478 nt	EF015886	Brown et al. 2009. Resolving ambiguities in genetic typing of human enterovirus species C isolates and identification of enterovirus 96, 99 and 102. J. Gen. Virol. 90 (PT 7):1713-1723.
	EV-C99	enterovirus C99 strain USA-GA84-10636 (Georgia/US/1984)	7447 nt	EF555644	Brown et al. 2009. Resolving ambiguities in genetic typing of human enterovirus species C isolates and identification of enterovirus 96, 99 and 102. J. Gen. Virol. 90 (PT 7):1713-1723.
	EV-C102	enterovirus C102 strain BAN99-10499 (Bangladesh/1999)	7438 nt	EF555645	Brown et al. 2009. Resolving ambiguities in genetic typing of human enterovirus species C isolates and identification of enterovirus 96, 99 and 102. J. Gen. Virol. 90 (PT 7):1713-1723.
	EV-C104	enterovirus C104 strain CL-1231094 (Switzerland)	7229 nt	EU840733	Tapparel et al. 2009. New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses. Emerging Infect. Dis. 15 (5):719-726.
	EV-C105	enterovirus C105 strain PER153 (Peru/2010)	7309 nt	JX393302	Tokarz et al. 2013. Genomic analysis of two novel human enterovirus C genotypes found in respiratory samples from Peru. J. Gen. Virol. 94 (1):120-127.
	EV-C109	enterovirus C109 strain NICA08-4327 (Nicaragua/2008)	7354 nt	GQ865517	Yozwiak et al. 2010. Human enterovirus 109: a novel interspecies recombinant enterovirus isolated from a case of acute pediatric respiratory illness in Nicaragua. J. Virol. 84 (18):9047-9058.
	EV-C113	enterovirus C113 strain BBD-48 (Bangladesh/2006)	7318 nt	KC344833	Tokarz et al. 2013. Genomic analysis of coxsackieviruses A1, A19, A22, enteroviruses 113 and 104: viruses representing two clades with distinct tropism within enterovirus C. J. Gen. Virol. 94 (PT 9):1995-2004.
	EV-C116	enterovirus C116 strain 126/Russia/201	7395 nt	JX514942	Lukashev et al. 2012. Novel serotypes 105 and 116 are members of distinct subgroups of human enterovirus C. J. Gen. Virol. 93 (PT 11):2357-2362.
	EV-C117	enterovirus C117 strain LIT22/Vilnius (Lithuania/2011)	7363 nt	JX262382	Daleno et al. 2012. Complete genome sequence of a novel human enterovirus C (HEV-C117) identified in a child with community-acquired pneumonia. J. Virol. 86 (19):10888-10889.
	EV-C118	enterovirus C118 strain ISR10 (Israel/2011)	7357 nt	JX961708	Daleno et al. 2012. Complete genome sequence of a novel human enterovirus C (HEV-C117) identified in a child with community-acquired pneumonia. J. Virol. 86 (19):10888-10889.
*Enterovirus D*	EV-D68	enterovirus D68 strain Fermon (California/62)	7367 nt	AY426531	Oberste et al. 2004. Enterovirus 68 is associated with respiratory illness and shares biological features with both the enteroviruses and the rhinoviruses. J. Gen. Virol. 85 (PT 9):2577-2584.
	EV-D68	enterovirus D68 strain F02-3607-Corn [formerly rhinovirus 87]	936 nt (VP1)	AY355268	Ledford et al. 2004. VP1 sequencing of all rhinovirus serotypes: insights into genus phylogeny and susceptibility to antiviral capsid-binding compounds. J. Virol. 78 (7):3663-3674.
	EV-D70	enterovirus D70 strain J670/71 (Japan/71)	7390 nt	D00820	Ryan et al. 1990. The complete nucleotide sequence of enterovirus type 70: relationships with other members of the Picornaviridae. J. Gen. Virol. 71 (PT 10):2291-2299.
	EV-D94	enterovirus D94 strain E210 (Egypt)	7364 nt	DQ916376	Smura et al. 2007. Enterovirus 94, a proposed new serotype in human enterovirus species D. J. Gen. Virol. 88 (PT 3):849-858.
	EV-D111	enterovirus D111 [chimpanzee enterovirus CPS-2011] strain KK2640 (chimpanzee/Cameroon/2007)	424 nt (par 5' UTR)	JF416929	Harvala et al. 2011. Detection and genetic characterization of enteroviruses circulating among wild populations of chimpanzees in Cameroon: Relationship with human and simian enteroviruses. J. Virol. 85 (9):4480-4486.
			404 nt (VP4/VP2)	JF416932	Harvala et al. 2011. Detection and genetic characterization of enteroviruses circulating among wild populations of chimpanzees in Cameroon: Relationship with human and simian enteroviruses. J. Virol. 85 (9):4480-4486.
			1051 nt (VP1)	JF416935	Harvala et al. 2011. Detection and genetic characterization of enteroviruses circulating among wild populations of chimpanzees in Cameroon: Relationship with human and simian enteroviruses. J. Virol. 85 (9):4480-4486.
			937 nt (par 3D)	JF416938	Harvala et al. 2011. Detection and genetic characterization of enteroviruses circulating among wild populations of chimpanzees in Cameroon: Relationship with human and simian enteroviruses. J. Virol. 85 (9):4480-4486.
	EV-D120	enterovirus D120 strain MB6201 (gorilla/Cameroon)	1293 nt (VP1)	KF040080	Harvala et al. 2014. Co-circulation of enteroviruses between apes and humans. J. Gen. Virol. 95 (PT 2):403-407.
*Enterovirus E*	EV-E1	enterovirus E1 strain VG-5-27 [formerly bovine enterovirus 1]	7414 nt	D00214	Earle et al. 1988. The complete nucleotide sequence of bovine enterovirus. J. Gen. Virol. 69 (PT 2):253-263.
	EV-E1		7414 nt	NC_001859	Earle et al. 1988. The complete nucleotide sequence of bovine enterovirus. J. Gen. Virol. 69 (PT 2):253-263.
	EV-E2	enterovirus E2 strain PS42 (ATCC VR-758)	7412 nt	DQ092792	Zell et al. 2006. Molecular-based reclassification of the bovine enteroviruses. J. Gen. Virol. 87 (PT 2):375-385.
	EV-E3	enterovirus E3 strain D 14/3/96 (Germany/1996)	3416 nt (5' UTR, P1)	DQ092786	Zell et al. 2006. Molecular-based reclassification of the bovine enteroviruses. J. Gen. Virol. 87 (PT 2):375-385.
	EV-E4	enterovirus E4 strain PAK-NIH-21E5 (sewage/Karachi/2009)	219 nt (par 5' UTR)	JQ690748	Shaukat et al. 2012. Molecular identification and characterization of a new type of bovine enteroviruses. Appl. Environ. Microbiol. 78 (12):4497-4500.
	EV-E4	enterovirus E4 strain PAK-NIH-21E5 (sewage/Karachi/2009)	840 nt (par VP1)	JQ690741	Shaukat et al. 2012. Molecular identification and characterization of a new type of bovine enteroviruses. Appl. Environ. Microbiol. 78 (12):4497-4500.
	EV-E5	enterovirus E5 strain MexKSU/5 (Mexico/2015)	7451 nt	KU172420	Mitra et al. 2016. Metagenomic characterization of the virome associated with bovine respiratory disease in feedlot cattle identified novel viruses and suggests an etiolical role for influenza D virus. J. Gen. Virol. 97 (8):1771-1784.
*Enterovirus F*	EV-F1	enterovirus F1 strain BEV-261; alternative strain designations in literature: M2; RM2 [formerly bovine enterovirus 2]	7397 nt	DQ092770	Zell et al. 2006. Molecular-based reclassification of the bovine enteroviruses. J. Gen. Virol. 87 (PT 2):375-385.
	EV-F1		7397 nt	NC_021220	Zell et al. 2006. Molecular-based reclassification of the bovine enteroviruses. J. Gen. Virol. 87 (PT 2):375-385.
	EV-F2	enterovirus F2 strain PS89	7389 nt	DQ092795	Zell et al. 2006. Molecular-based reclassification of the bovine enteroviruses. J. Gen. Virol. 87 (PT 2):375-385.
	EV-F3	enterovirus F3 strain PS87/Belfast (ATCC VR-774)	7394 nt	DQ092794	Zell et al. 2006. Molecular-based reclassification of the bovine enteroviruses. J. Gen. Virol. 87 (PT 2):375-385.
	EV-F4	enterovirus F4 strain W1 (brushtail possum/New Zealand)	7390 nt	AY462106	Zheng T. 2007. Characterization of two enteroviruses isolated from Australian brushtail possums (Trichosurus vulpecula) in New Zealand. Arch. Virol. 152 (1):191-198.
	EV-F5	enterovirus F5 strain M80 (Norfolk/England/1960)	7361 nt	unpublished	Knowles et al., unpublished.
	EV-F6	enterovirus F6 strain T11f (Great Britain/1960)	7358 nt	unpublished	Knowles et al., unpublished.
	EV-F7	enterovirus F7 strain AN12/Bos Taurus/JPN/2014	7414 nt	LC038188	Tsuchiaka et al. 2017. Identification of a novel bovine enterovirus possessing highly divergent amino acid sequences in capsid protein. BMC Microbiol. 17 (1):18.
*Enterovirus G*	EV-G1	enterovirus G1 strain UKG-410-73 [formerly porcine enterovirus 9]	7388 nt	AF363453	Krumbholz et al. 2002. Sequencing of porcine enterovirus groups II and III reveals unique features of both virus groups. J. Virol. 76 (11):5813-5821.
	EV-G1		7388 nt	NC_004441	Krumbholz et al. 2002. Sequencing of porcine enterovirus groups II and III reveals unique features of both virus groups. J. Virol. 76 (11):5813-5821.
	EV-G2	enterovirus G2 strain LP54 (England/75) [formerly porcine enterovirus 10]	7401 nt	AF363455	Krumbholz et al. 2002. Sequencing of porcine enterovirus groups II and III reveals unique features of both virus groups. J. Virol. 76 (11):5813-5821.
	EV-G3	enterovirus G3 strain sw/K23/2008/HUN	7391 nt	HQ702854	Boros et al. 2011. Characterization of a novel porcine enterovirus in domestic pigs in Hungary. Inf. Genet. Evol. 11 (5):1096-1102.
	EV-G4	enterovirus G4 strain wild boar/WBD/2011/HUN	7387 nt	JN807387	Boros et al. 2012. Characterization of a novel porcine enterovirus in wild boar in Hungary. Arch. Virol. 157 (5):981-986.
	EV-G5	enterovirus G5 strain ovine/TB4-OEV/2009/HUN	7408 nt	JQ277724	Boros et al. 2012. Natural interspecies recombinant bovine/porcine enterovirus in sheep. J. Gen. Virol. 93 (PT 9):1941-1951.
	EV-G6	enterovirus G6 strain sw/2009/KOR	7393 nt	JQ818253	Moon et al. 2012. Complete genome analysis of porcine enterovirus B isolated ion Korea. J. Virol. 86 (18):10250.
	EV-G7	enterovirus G7 strain ovine/990/UK-NI	7370 nt	MG958646	Bachanek-Bankowska et al., unpublished.
	EV-G8	enterovirus G8 strain sw/714418/CaoLanh_VN/2012-02-21	7232 nt	KT265911	Nguyen et al., unpublished.
	EV-G9	enterovirus G9 strain 734087/ThanBinh_VN/2012-03-20	7220 nt	KT265961	Nguyen et al., unpublished.
	EV-G10	enterovirus G10 strain sw/PoEnV-BEL-12R021	7396 nt	KP982873	Theuns et al., unpublished.
	EV-G11	enterovirus G11 strain sw/744257/2012/Vietnam	846 nt (VP1)	KJ156451	Van Dung et al. 2014. Prevalence, genetic diversity and recombination of species G enteroviruses infecting pigs in Vietnam. J. Gen. Virol. 95 (PT 3):549-556.
	EV-G12	enterovirus G12 strain sw/714222/CaoLanh/VN/2012-02-16	846 nt (VP1)	KT265900	Nguyen et al., unpublished.
	EV-G13	enterovirus G13 strain sw/714270/CaoLanh/VN/2012-02-16	843 nt (VP1)	KT265903	Nguyen et al., unpublished.
	EV-G14	enterovirus G14 strain sw/714405/CaoLanh/VN/2012-02-21	849 nt (VP1)	KT265909	Nguyen et al., unpublished.
	EV-G15	enterovirus G15 strain sw/724307/ChauThanh_VN/2012-03-14	849 nt (VP1)	KT265941	Nguyen et al., unpublished.
	EV-G16	enterovirus G16 strain wild boar/BS14-173H2/DakLak_VN/2014	792 nt (VP1)	KT266010	Nguyen et al., unpublished.
	EV-G17	enterovirus G17 strain sw/08/NC_USA/2015	7981 nt	KY761948	Shang et al. 2017. A naturally occurring recombinant enterovirus expresses a torovirus deubiquitinase. J. Virol. 91 (14):e00450-17.
	EV-G18	enterovirus G18 strain sw/GER/F26-2/23-12-2013	955 nt (VP1)	MF113370	Bunke et al. 2018. High genetic diversisty of porcine enterovirus G in Schleswig-Holstein, Germany. Arch. Virol. 163 (2):489-493.
	EV-G19	enterovirus G19 strain sw/GER/F8-2/04-02-2013	952 nt (VP1)	MF113372	Bunke et al. 2018. High genetic diversisty of porcine enterovirus G in Schleswig-Holstein, Germany. Arch. Virol. 163 (2):489-493.
	EV-G20	enterovirus G20 strain goat/JL14/CHA/2014	7461 nt	KU297674	Wang et al. 2017. A novel enterovirus species identified from severe diarrheal goats. PLoS ONE. 12 (4):E0174600.
	untyped	strain PoEV_VIRES_GX03_C1	7825 nt	MK378695	He, B. & Tu, C. 2018. Unpublished.
	untyped	strain PoEV_VIRES_HLJ01_C2	2109 nt (1Bp-2Ap)	MK378732	He, B. & Tu, C. 2018. Unpublished.
	untyped	strain PoEV_VIRES_HLJ01_C2	2109 nt (1Bp-2Ap)	MK378732	He, B. & Tu, C. 2018. Unpublished.
	untyped	strain VIRES_HuN01_C1	6800 nt (1Ap-3Dp)	MK378734	He, B. & Tu, C. 2018. Unpublished.
	untyped	strain PoEV_VIRES_NM01_C1	4832 nt (1Ap-3Dp)	MK378745	He, B. & Tu, C. 2018. Unpublished.
	untyped	strain PoEV_VIRES_NM02_C1	7329 nt	MK378746	He, B. & Tu, C. 2018. Unpublished.
	untyped	strain PoEV_VIRES_YN01_C1	7375 nt	MK378752	He, B. & Tu, C. 2018. Unpublished.
*Enterovirus H*	EV-H1	enterovirus H1 strain 1715 UWB [simian enterovirus]	7295 nt	AF326759	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
	EV-H1	enterovirus H1 strain 1715 UWB [simian enterovirus]	7295 nt	NC_038309	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
	EV-H1	enterovirus H1 strain A2 plaque virus [simian enterovirus]	7374 nt	AF201894	Liu et al. 2000. Sequencing and characterization of A-2 plaque virus: A new member of the Picornaviridae family. Virology 272 (1):168-176.
*Enterovirus I*	EV-I1	enterovirus I1 strain 19CC [dromedary camel enterovirus 1]	7441 nt	KP345887	Woo et al. 2015. A novel dromedary camel enterovirus in family Picornaviridae from dromedaries in the Middle East. J. Gen. Virol. 96 (PT 7):1723-1731.
	EV-I1	enterovirus I1 strain 19CC [dromedary camel enterovirus 1]	7441 nt	KP345887, NC_038310	Woo et al. 2015. A novel dromedary camel enterovirus in family Picornaviridae from dromedaries in the Middle East. J. Gen. Virol. 96 (PT 7):1723-1731.
	EV-I2	enterovirus I2 strain 20CC [dromedary camel enterovirus 1]	7457 nt	KP345888	Woo et al. 2015. A novel dromedary camel enterovirus in family Picornaviridae from dromedaries in the Middle East. J. Gen. Virol. 96 (PT 7):1723-1731.
*Enterovirus J*	EV-J1	enterovirus J1 strain SV6-1631	7351 nt	AF326766	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
	EV-J1	enterovirus J1 strain SV6-1631	7351 nt	NC_010415	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
	EV-J103	enterovirus J103 strain USA/GA99-POo-1 (Macaca nemestrina/Georgia/US/1999)	7355 nt	FJ007373	Oberste et al. 2008. The complete genome sequences for three simian enterovirses isolated from captive primates. Arch. Virol. 153 (11):2117-2122.
	EV-J108	enterovirus J108 strain N125	7383 nt	AF414372	Oberste et al. 2002. Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76 (3):1244-1251.
	EV-J112	enterovirus J112 strain BAN/2008/717920	852 nt (VP1)	JX537981	Oberste et al. 2013. Naturally Acquired Picornavirus Infections in Primates at the Dhaka Zoo. J. Virol. 87 (1):572-580.
	EV-J115	enterovirus J115 strain BAN/2008/711221	1253 nt (VP1)	JX537991	Oberste et al. 2013. Naturally Acquired Picornavirus Infections in Primates at the Dhaka Zoo. J. Virol. 87 (1):572-580.
	EV-J121	enterovirus J121 strain CPZ_CHE20	1680 nt (VP3p-VP1-2Ap)	KF541639	Sadeuh-Mba et al. 2014. Characterization of Enteroviruses from Non-Human Primates in Cameroon Revealed Virus Types Widespread in Humans along with Candidate New Types and Species. PLoS Negl Trop Dis 8 (7):E3052.
	EV-J121	enterovirus J121 strain CPZ_CHE20	966 nt (3Dp)	KF648606	Sadeuh-Mba et al. 2014. Characterization of Enteroviruses from Non-Human Primates in Cameroon Revealed Virus Types Widespread in Humans along with Candidate New Types and Species. PLoS Negl Trop Dis 8 (7):E3052.
*Enterovirus K*	EV-K1	enterovirus K1 strain Rodent/Ee/PicoV/NX2015	7805 nt	KX156158	Du et al. 2016. Distribution and characteristics of rodent picornaviruses in China. Sci. Rep. 6:34381.
	EV-K1	enterovirus K1 strain Rodent/Ee/PicoV/NX2015	7805 nt	NC_038989	Du et al. 2016. Distribution and characteristics of rodent picornaviruses in China. Sci. Rep. 6:34381.
	EV-K2	enterovirus K2 strain Rodent/Mc/PicoV/Tibet2015	7909 nt	KX156159	Du et al. 2016. Distribution and characteristics of rodent picornaviruses in China. Sci. Rep. 6:34381.
*Enterovirus L*	EV-L1	enterovirus L1 strain Macaca mulatta/SEV-gx/2014/China	7367 nt	KU587555	Ao et al. unpublished.
*Enterovirus L*	EV-L1	enterovirus L1 strain Macaca mulatta/SEV-gx/2014/China	7367 nt	NC_029905	Ao et al. unpublished.
*Rhinovirus A*	RV-A1A	rhinovirus A1A strain 2060 (Ohio) [ATCC VR-1559]	7137 nt	FJ445111	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A1B	rhinovirus A1B strain B632	7133 nt	D00239	Hughes et al. 1988. The nucleotide sequence of rhinovirus 1B: molecular relationships within the rhinovirus genus. J. Gen. Virol. 69 (PT 1):49-58.
	RV-A2	rhinovirus A2 strain HGP	7102 nt	X02316	Skern et al. 1985. rhinovirus 2: complete nucleotide sequence and proteolytic processing signals in the capsid protein region. Nucleic Acids Res. 13 (6):2111-2126.
	RV-A7	rhinovirus A7 strain 69CV11	7146 nt	DQ473503	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A8	rhinovirus A8 strain MRH-CV12 [ATCC VR-1118]	7108 nt	FJ445113	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A9	rhinovirus A9 strain 211-CV13 [ATCC VR-489]	7132 nt	FJ445177	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A10	rhinovirus A10 strain 204-CV14	7137 nt	DQ473498	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A11	rhinovirus A11 strain 1-CV15	7125 nt	EF173414	Tapparel et al. 2007. New complete genome sequences of rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 8 (1):224.
	RV-A12	rhinovirus A12 strain 181-CV16	7124 nt	EF173415	Tapparel et al. 2007. New complete genome sequences of rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 8 (1):224.
	RV-A13	rhinovirus A13 strain 353 (South Carolina/59) [ATCC VR-1123]	7140 nt	FJ445116	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A15	rhinovirus A15 strain 1734 (South Carolina/60)	7137 nt	DQ473493	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A16	rhinovirus A16 strain 11757 (Washington DC/60)	7124 nt	L24917	Lee et al. 1995. Complete sequence of the RNA genome of rhinovirus 16, a clinically useful common cold virus belonging to the ICAM-1 receptor group. Virus Genus 9(12):177-181.
	RV-A18	rhinovirus A18 strain 5986-CV17 [ATCC VR-1128]	7140 nt	FJ445118	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A19	rhinovirus A19 strain ATCC VR-1129	7140 nt	FJ445119	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A20	rhinovirus A20 strain ATCC VR-1130	7163 nt	FJ445120	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A21	rhinovirus A21 strain ATCC VR-1131	7140 nt	FJ445121	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A22	rhinovirus A22 strain ATCC VR-1132	7129 nt	FJ445122	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A23	rhinovirus A23 strain 5124-CV24	7025 nt	DQ473497	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A24	rhinovirus A24 strain 5146-CV25	7025 nt	EF173416	Tapparel et al. 2007. New complete genome sequences of rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 8 (1):224.
	RV-A25	rhinovirus A25 strain ATCC VR-1135	7126 nt	FJ445123	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A28	rhinovirus A28 strain 6101-CV29	7099 nt	DQ473508	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A29	rhinovirus A29 strain ATCC VR-1139	7123 nt	FJ445125	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A30	rhinovirus A30 strain 106F	7099 nt	DQ473512	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A31	rhinovirus A31 strain ATCC VR-506	7123 nt	FJ445126	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A32	rhinovirus A32 strain ATCC VR-1142	7133 nt	FJ445127	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A33	rhinovirus A33 strain ATCC VR-330	7133 nt	FJ445128	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A34	rhinovirus A34 strain 137-30	7099 nt	DQ473501	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A36	rhinovirus A36 strain 342H	7141 nt	DQ473505	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A38	rhinovirus A38 strain CH79	7136 nt	DQ473495	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A39	rhinovirus A39 strain 209 (North Carolina/61)	7137 nt	AY751783	Harris & Racaniello. 2005. Amino acid changes in proteins 2B and 3A mediate rhinovirus type 39 growth in mouse cells. J. Virol. 79 (9):5363-5373.
	RV-A40	rhinovirus A40 strain ATCC VR-341	7138 nt	FJ445129	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A41	rhinovirus A41 strain 56110 (North Carolina/61)	7145 nt	DQ473491	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A43	rhinovirus A43 strain ATCC VR-1153	7129 nt	FJ445131	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A45	rhinovirus A45 strain ATCC VR-1155	7114 nt	FJ445132	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A46	rhinovirus A46 strain Crell (Texas/64) [Baylor 2]	7149 nt	DQ473506	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A47	rhinovirus A47 strain ATCC VR-1157	7132 nt	FJ445133	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A49	rhinovirus A49 strain 8213	7106 nt	DQ473496	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A50	rhinovirus A50 strain ATCC VR-517	7118 nt	FJ445135	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A51	rhinovirus A51 strain ATCC VR-1161	7118 nt	FJ445136	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A53	rhinovirus A53 strain F01-3928	7143 nt	DQ473507	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A54	rhinovirus A54 strain ATCC VR-1165	7134 nt	FJ445138	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A55	rhinovirus A55 strain Wis315E (Wisconsin/64)	7036 nt	DQ473511	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A56	rhinovirus A56 strain CH82 (V-151-011-021) [ATCC VR-1166]	7136 nt	FJ445140	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A57	rhinovirus A57 strain fs ship#1-hHRV-57	7134 nt	FJ445141	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A58	rhinovirus A58 strain ATCC VR-1168	7140 nt	FJ445142	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A59	rhinovirus A59 strain 611-CV35	7135 nt	DQ473500	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A60	rhinovirus A60 strain ATCC VR-1473	7139 nt	FJ445143	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A61	rhinovirus A61 strain ATCC VR-1171	7139 nt	FJ445144	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A62	rhinovirus A62 strain ATCC VR-1172	7131 nt	FJ445145	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A63	rhinovirus A63 strain ATCC VR-1173	7141 nt	FJ445146	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A64	rhinovirus A64 strain 6258-CV44	7129 nt	EF173417	Tapparel et al. 2007. New complete genome sequences of rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 8 (1):224.
	RV-A65	rhinovirus A65 strain ATCC VR-1175	7162 nt	FJ445147	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A66	rhinovirus A66 strain ATCC VR-1176	7139 nt	FJ445148	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A67	rhinovirus A67 strain ATCC VR-1177	7135 nt	FJ445149	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A68	rhinovirus A68 strain ATCC VR-1178	7164 nt	FJ445150	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A71	rhinovirus A71 strain ATCC VR-1181	7161 nt	FJ445152	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A73	rhinovirus A73 strain 107E	7140 nt	DQ473492	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A74	rhinovirus A74 strain 328A	7120 nt	DQ473494	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A75	rhinovirus A75 strain 328F	7137 nt	DQ473510	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A76	rhinovirus A76 strain H00062	7129 nt	DQ473502	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-A77	rhinovirus A77 strain ATCC VR-1187	7136 nt	FJ445154	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A78	rhinovirus A78 strain 2030-65	7145 nt	EF173418	Tapparel et al. 2007. New complete genome sequences of rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 8 (1):224.
	RV-A80	rhinovirus A80 strain ATCC VR-1190	7138 nt	FJ445156	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-A81	rhinovirus A81 strain ATCC VR-1191	7116 nt	FJ445157	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
RV-A82	rhinovirus A82 strain Santa Cruz (California)	7129 nt	DQ473509	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
RV-A85	rhinovirus A85 strain ATCC VR-1195	7140 nt	FJ445163	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
RV-A88	rhinovirus A88 strain CVD 01-0165-Dambrauskas	7143 nt	DQ473504	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
RV-A89	rhinovirus A89 strain 41467-Gallo	7143 nt	M16248	Duechler et al. 1987. Evolutionary relationships within the human rhinovirus genus: comparison of serotypes 89, 2, and 14. PNAS 84 (9):2605-2609.
RV-A90	rhinovirus A90 strain ATCC VR-1291	7124 nt	FJ445167	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
RV-A94	rhinovirus A94 strain SF-1803	7132 nt	EF173419	Tapparel et al. 2007. New complete genome sequences of rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 8 (1):224.
RV-A96	rhinovirus A96 strain ATCC VR-1296	7134 nt	FJ445171	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
RV-A100	rhinovirus A96 strain ATCC VR-1300	7134 nt	FJ445175	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
RV-A101	rhinovirus A101 strain hRV-A101 (Madison/WI/2000)	7130 nt	GQ415051	Rathe et al. 2010. Full-genome sequence and analysis of a novel rhinovirus strain within a divergent HRV-A clade. Arch. Virol. 155 (1):83-87.
RV-A102	rhinovirus A102 strain AMS323	7217 nt	EF155421	de Vries et al. 2008. Human parechovirus type 1, 3, 4, 5, and 6 detection in picornavirus cultures. J. Clin. Microbiol. 46 (2):759-762.
RV-A103	rhinovirus A103 strain WA327E/09	7168 nt	JF965515	Chidlow et al., unpublished.
RV-A104	rhinovirus A104 strain P1025_sR2625_2009 (Madison/WI/2009) [formerly rhinovirus A24]	6843 nt	JN562727	Liggett et al. 2014. Genome sequences of rhinovirus A isolates from Wisconsin pediatric respiratory studies. Genome Announc. 2 (2):e00200-14.
RV-A105	rhinovirus A105 strain P1064_sR985_2009 (Madison/WI/2009) [formerly rhinovirus A57]	6709 nt	JN614995	Liggett et al. 2014. Genome sequences of rhinovirus A isolates from Wisconsin pediatric respiratory studies. Genome Announc. 2 (2):e00200-14.
RV-A106	rhinovirus A106 strain P1044_sR114_2008 (USA/2008) [formerly rhinovirus A71]	7127 nt	JQ245971	Liggett et al. 2014. Genome sequences of rhinovirus A isolates from Wisconsin pediatric respiratory studies. Genome Announc. 2 (2):e00200-14.
RV-A107	rhinovirus A107 strain S07259 [formerly rhinovirus A71]	990 nt (VP1)	KC859319	Cuevas et al., unpublished.
RV-A108	rhinovirus A108 strain S07696 [formerly rhinovirus A71]	1008 nt (VP1)	KC859318	Cuevas et al., unpublished.
RV-A109	rhinovirus A109 strain F0062-V1		unpublished	Zlateva et al., unpublished.
*Rhinovirus B*	RV-B3	rhinovirus B3 strain FEB	7208 nt	DQ473485	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-B4	rhinovirus B4 strain 16/60	7212 nt	DQ473490	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-B5	rhinovirus B5 strain Norman [ATCC VR-485]	7212 nt	FJ445112	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B6	rhinovirus B6 strain Thompson	7216 nt	DQ473486	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-B14	rhinovirus B14 strain 1059 (South Carolina/59)	7212 nt	K02121	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-B14	rhinovirus B14 strain 1059 (South Carolina/59)	7212 nt	NC_001490	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-B17	rhinovirus B17 strain 33342 (North Carolina/59)	7219 nt	EF173420	Tapparel et al. 2007. New complete genome sequences of rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 8 (1):224.
	RV-B26	rhinovirus B26 strain 5660-CV27 [ATCC VR-1136]	7211 nt	FJ445124	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B27	rhinovirus B27 strain 5870-CV28 [ATCC VR-1137]	7217 nt	FJ445186	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B35	rhinovirus B35 strain 164A	7224 nt	DQ473487	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-B37	rhinovirus B37 strain 151-1	7216 nt	EF173423	Tapparel et al. 2007. New complete genome sequences of rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 8 (1):224.
	RV-B42	rhinovirus B42 strain 56822 (North Carolina/61) [ATCC VR-338]	7223 nt	FJ445130	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B48	rhinovirus B48 strain 1505	7214 nt	DQ473488	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-B52	rhinovirus B52 strain F01-3772 [ATCC VR-1162]	7216 nt	FJ445188	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B69	rhinovirus B69 strain F01-2513-Mitchinson [ATCC VR-1179]	7211 nt	FJ445151	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B70	rhinovirus B70 strain F02-2547-Treganza	7223 nt	DQ473489	Kistler et al. 2007. Genome-wide diversity and selective pressure in the rhinovirus. Virol. J. 4:40.
	RV-B72	rhinovirus B72 strain K2207 [ATCC VR-1182]	7216 nt	FJ445153	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B79	rhinovirus B79 strain 101-1 [ATCC VR-1189]	7224 nt	FJ445155	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B83	rhinovirus B83 strain Baylor 7 [ATCC VR-1193]	7230 nt	FJ445161	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B84	rhinovirus B84 strain 432D [ATCC VR-1194]	7213 nt	FJ445162	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B86	rhinovirus B86 strain 121564-Johnson [ATCC VR-1196]	7213 nt	FJ445164	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B91	rhinovirus B91 strain JM1 [ATCC VR-1292]	7221 nt	FJ445168	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B92	rhinovirus B92 strain SF-1662 [ATCC VR-1293]	7233 nt	FJ445169	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B93	rhinovirus B93 strain SF-1492	7215 nt	EF173425	Tapparel et al. 2007. New complete genome sequences of rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 8 (1):224.
	RV-B97	rhinovirus B97 strain SF-1372 [ATCC VR-1297]	7207 nt	FJ445172	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B99	rhinovirus B99 strain 604 [ATCC VR-1299]	7208 nt	FJ445174	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B100	rhinovirus B100 strain CU211 (Thailand/2006)	6537 nt	HQ123444	Linsuwanon et al. 2009. Complete coding sequence characterization and comparative analysis of the putative novel rhinovirus (HRV) species C and B. Virology J. 8 (1):5.
	RV-B101	rhinovirus B101 strain p1156_sR810_2007 (Madison/WI/2007) [formerly rhinovirus B35]	6920 nt	JF781500	Liggett et al. 2014. Genome sequences of rhinovirus A isolates from Wisconsin pediatric respiratory studies. Genome Announc. 2 (2):e00200-14.
	RV-B102	rhinovirus B102 strain p1044_sR122_2007 (Madison/WI/2007) [formerly rhinovirus B92]	7189 nt	JX074053	Liggett et al. 2014. Genome sequences of rhinovirus A isolates from Wisconsin pediatric respiratory studies. Genome Announc. 2 (2):e00200-14.
	RV-B103	rhinovirus B103 strain p1160_sR1153_2009 (Madison/WI/2009) [formerly rhinovirus B06]	6899 nt	JN614996	Liggett et al. 2014. Genome sequences of rhinovirus A isolates from Wisconsin pediatric respiratory studies. Genome Announc. 2 (2):e00200-14.
	RV-B104	rhinovirus B104 strain F10 [formerly rhinovirus B52]	7216 nt	FJ445137	Palmenberg et al. 2009. Sequencing and analyses of all known rhinovirus genomes reveal structure and evolution. Science 324 (5923):55-59.
	RV-B105	rhinovirus B105 strains H4923-V0 and H5048-V0		unpublished	Zlateva et al. unpublished.
	RV-B106	rhinovirus B106 strains D2622-V1 and E2217-V1		unpublished	Zlateva et al. unpublished.
*Rhinovirus C*	RV-C1	rhinovirus C1 strain NAT001	6944 nt	EF077279	Kistler et al. 2007. Pan-viral screening of respiratory tract infections in adults with and without asthma reveals unexpected human coronavirus and rhinovirus diversity. J. Infect. Dis. 196 (6):817-825.
	RV-C1	rhinovirus C1 strain NAT001	6944 nt	NC_038878	Kistler et al. 2007. Pan-viral screening of respiratory tract infections in adults with and without asthma reveals unexpected human coronavirus and rhinovirus diversity. J. Infect. Dis. 196 (6):817-825.
	RV-C2	rhinovirus C2 strain NAT045	7015 nt	EF077280	Kistler et al. 2007. Pan-viral screening of respiratory tract infections in adults with and without asthma reveals unexpected human coronavirus and rhinovirus diversity. J. Infect. Dis. 196 (6):817-825.
	RV-C3	rhinovirus C3 strain QPM	7134 nt	EF186077	McErlean et al. 2007. Characterisation of a newly identified rhinovirus, HRV-QPM, discovered in infants with bronchiolitis. J. Clin. Virol. 39 (6):67-75.
	RV-C4	rhinovirus C4 strain 024	7099 nt	EF582385	Lau et al. 2007. Clinical features and complete genome characterization of a distinct rhinovirus (HRV) genetic cluster, probably representing a previously undetected HRV species, RV-C, associated with acute respiratory illness in children. J. Clin. Microbiol. 45 (11):3655-3664.
	RV-C5	rhinovirus C5 strain 025	7114 nt	EF582386	Lau et al. 2007. Clinical features and complete genome characterization of a distinct rhinovirus (HRV) genetic cluster, probably representing a previously undetected HRV species, RV-C, associated with acute respiratory illness in children. J. Clin. Microbiol. 45 (11):3655-3664.
	RV-C6	rhinovirus C6 strain 026	7086 nt	EF582387	Lau et al. 2007. Clinical features and complete genome characterization of a distinct rhinovirus (HRV) genetic cluster, probably representing a previously undetected HRV species, RV-C, associated with acute respiratory illness in children. J. Clin. Microbiol. 45 (11):3655-3664.
	RV-C6	rhinovirus C6 strain p1264_s3778_1999	6528 nt	JN815245	Liggett et al. 2014. Genome sequences of rhinovirus C isolates from wisconsin pediatric respiratory studies. Genome Announc 2 (2):e00203-14.
	RV-C7	rhinovirus C7 strain NY-074/1078	7072 nt	DQ875932	Lamson et al. 2006. MassTag polymerase-chain-reaction detection of respiratory pathogens, including a new rhinovirus genotype, that caused influenza-like illness in New York State during 2004-2005. J. Infect. Dis. 194 (10):1398-1402.
	RV-C7	rhinovirus C7 strain p1028_sR3259_2010	6423 nt	JN798570	Liggett et al. 2014. Genome sequences of rhinovirus C isolates from wisconsin pediatric respiratory studies. Genome Announc 2 (2):e00203-14.
	RV-C8	rhinovirus C8 strain N4	7107 nt	GQ223227	Huang et al. 2009. Evidence of recombination and genetic diversity in human rhinoviruses in children with acute respiratory infection. PLoS ONE 4 (7):E6355.
	RV-C9	rhinovirus C9 strain N10	7111 nt	GQ223228	Huang et al. 2009. Evidence of recombination and genetic diversity in human rhinoviruses in children with acute respiratory infection. PLoS ONE 4 (7):E6355.
	RV-C10	rhinovirus C10 strain QCE	7010 nt	GQ323774	Arden et al. 2010. Molecular characterization and distinguishing features of a novel rhinovirus (HRV) C, HRVC-QCE, detected in children with fever, cough and wheeze during 2003. J. Clin. Virol. 47 (3):219-223.
	RV-C11	rhinovirus C11 strain CL-170085	7108 nt	EU840952	Tapparel et al. 2009. New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses. Emerging Infect. Dis. 15 (5):719-726.
	RV-C12	rhinovirus C12 strain Resp_3922/07	834 nt (VP1)	HM236958	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C13	rhinovirus C13 strain Resp_2551/06	819 nt (VP1)	HM236908	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C14	rhinovirus C14 strain Resp_3090/06	822 nt (VP1)	HM236911	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C15	rhinovirus C15 prototype strain Resp_4644/07	840 nt (VP1)	HM236963	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
		rhinovirus C15 strain W10	7119 nt	GU219984	Rathe et al. unpublished.
		rhinovirus C15 strain p1259_s2935_1999	7001 nt	JN837688	Liggett et al. 2014. Genome sequences of rhinovirus C isolates from wisconsin pediatric respiratory studies. Genome Announc 2 (2):e00203-14
	RV-C16	rhinovirus C16 strain Resp_5910/07	822 nt (VP1)	HM236944	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C17	rhinovirus C17 strain Resp_5145/07	822 nt (VP1)	HM236936	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C18	rhinovirus C18 strain Resp_3631/07	840 nt (VP1)	HM236918	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C19	rhinovirus C19 strain CL-Fnp5	3055 nt (P1)	EU840728	Tapparel et al. 2009. New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses. Emerging Infect. Dis. 15 (5):719-726.
	RV-C20	rhinovirus C20 strain Resp_3995/07	828 nt (VP1)	HM236923	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C21	rhinovirus C21 strain Resp_5071/07	822 nt (VP1)	HM236903	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C22	rhinovirus C22 prototype strain Resp_2748/06	822 nt (VP1)	HM236905	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C22	rhinovirus C22 strain 3430-MY-10	7090 nt	KJ675507	Khaw et al. 2016. Comparative Genetic Analyses of rhinovirus C (RV-C) Complete Genome from Malaysia. Front Microbiol 7:543.
	RV-C23	rhinovirus C23 prototype strain Resp_3053/06	822 nt (VP1)	HM236901	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C23	rhinovirus C23 strain 8713-MY-10	7112 nt	KJ675506	Khaw et al. 2016. Comparative Genetic Analyses of rhinovirus C (RV-C) Complete Genome from Malaysia. Front Microbiol 7:543.
	RV-C24	rhinovirus C24 strain Resp_7147/07	822 nt (VP1)	HM236939	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C25	rhinovirus C25 prototype strain Resp_2832/06	809 nt (VP1)	HM236952	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C25	rhinovirus C25 strain LZ269	7139 nt	JF317013	Yan et al. 2011. Unpublished.
	RV-C26	rhinovirus C26 strain Resp_2514/06	822 nt (VP1)	HM236904	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C27	rhinovirus C27 strain Resp_2784/06	813 nt (VP1)	HM236906	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C28	rhinovirus C28 strain Resp_3105/06	831 nt (VP1)	HM236954	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C29	rhinovirus C29 strain Resp_5345/07	822 nt (VP1)	HM236949	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C30	rhinovirus C30 strain Resp_3898/07	816 nt (VP1)	HM236968	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C31	rhinovirus C31 strain Resp_4923/07	797 nt (VP1)	HM236964	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C32	rhinovirus C32 strain Resp_6131/07	816 nt (VP1)	HM236897	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C33	rhinovirus C33 strain Resp_4917/07	834 nt (VP1)	HM236934	McIntyre et al. 2010. Analysis of genetic diversity and sites of recombination in human rhinovirus species C. J. Virol. 84 (19):10297-10310.
	RV-C34	rhinovirus C34 strain PNG7111-3625	852 nt (VP1)	JF519758	Chidlow et al. 2012. Respiratory viral pathogens associated with lower respiratory tract disease among young children in the highlands of Papua New Guinea. J. Clin. Virol. 54 (3):235-239.
		rhinovirus C34 strain LRTI-metagenomic-2	2832 nt (P1par)	JF436926	Lysholm et al. 2012. Characterization of the viral microbiome in patients with severe lower respiratory tract infections, using metagenomic sequencing. PLoS ONE 7 (2):E30875.
		rhinovirus C34 strain Mex14	6456 nt (polyprotein)	JF436926	Vazquez-Perez et al. Unpublished.
	RV-C35	rhinovirus C35 strain LRTI-metagenomic-1	6864 nt	JF436925	Lysholm et al. 2012. Characterization of the viral microbiome in patients with severe lower respiratory tract infections, using metagenomic sequencing. PLoS ONE 7 (2):E30875.
	RV-C36	rhinovirus C36 strain Resp_2480/07	810 nt (VP1)	JF416311	McIntyre & Simmonds. Unpublished.
		rhinovirus C36 strain Resp_3137/07	810 nt (VP1)	JF416314	McIntyre & Simmonds. Unpublished.
		rhinovirus C36 strain Resp_3451/07	810 nt (VP1)	JF416316	McIntyre & Simmonds. Unpublished.
		rhinovirus C36 strain Resp_3832/07	810 nt (VP1)	JF416317	McIntyre & Simmonds. Unpublished.
	RV-C37	rhinovirus C37 strain Resp_6135/08	812 nt (VP1)	JF416321	McIntyre & Simmonds. Unpublished.
	RV-C38	rhinovirus C38 strain Resp_6142/08	815 nt (VP1)	JF416322	McIntyre & Simmonds. Unpublished.
	RV-C39	rhinovirus C39 strain Resp_10221/08	818 nt (VP1)	JF416306	McIntyre & Simmonds. Unpublished.
	RV-C39	rhinovirus C36 strain WA823M02	7115 nt	JN205461
	RV-C40	rhinovirus C40 strain Resp_2800/08	812 nt (VP1)	JF416312	McIntyre & Simmonds. Unpublished.
		rhinovirus C40 strain Resp_3091/07	812 nt (VP1)	JF416313	McIntyre & Simmonds. Unpublished.
		rhinovirus C40 strain Resp_3373/07	812 nt (VP1)	JF416315	McIntyre & Simmonds. Unpublished.
	RV-C41	rhinovirus C41 strain Resp_9449/08	818 nt (VP1)	JF416323	McIntyre & Simmonds. Unpublished.
		rhinovirus C41 strain Resp_10061/08	818 nt (VP1)	JF416305	McIntyre & Simmonds. Unpublished.
		rhinovirus C41 strain 2536	7115 nt	KF958311	Nakagome et al. 2014. Effects of rhinovirus species on viral replication and cytokine production. J. Allergy Clin. Immunol. 134 (2):332-341.
	RV-C42	rhinovirus C42 strain Resp_5477/08	818 nt (VP1)	JF416320	McIntyre & Simmonds. Unpublished.
	RV-C43	rhinovirus C43 strain Resp_13229/08	815 nt (VP1)	JF416307	McIntyre & Simmonds. Unpublished.
	RV-C43	rhinovirus C43 strain Resp_14458/08	815 nt (VP1)	JF416309	McIntyre & Simmonds. Unpublished.
	RV-C44	rhinovirus C44 strain Resp_15588/09	833 nt (VP1)	JF416310	McIntyre & Simmonds. Unpublished.
	RV-C45	rhinovirus C45 strain Resp_13958/08	815 nt (VP1)	JF416308	McIntyre & Simmonds. Unpublished.
RV-C46	rhinovirus C46 strain Resp_5153/07	815 nt (VP1)	JF416318	McIntyre & Simmonds. Unpublished.
RV-C46	rhinovirus C46 strain Resp_5154/07	815 nt (VP1)	JF416319	McIntyre & Simmonds. Unpublished.
RV-C47	rhinovirus C47 strain PNG7254-3947	837 nt (VP1)	JF519760	Chidlow et al. 2012. Respiratory viral pathogens associated with lower respiratory tract disease among young children in the highlands of Papua New Guinea. J. Clin. Virol. 54 (3):235-239.
RV-C48	rhinovirus C48 strain PNG7293-3193	840 nt (VP1)	JF519762	Chidlow et al. 2012. Respiratory viral pathogens associated with lower respiratory tract disease among young children in the highlands of Papua New Guinea. J. Clin. Virol. 54 (3):235-239.
RV-C49	rhinovirus C49 strain WA1104OM	853 nt (VP1)	JF946738	Chidlow et al. Unpublished.
RV-C50	rhinovirus C50 strain human/Australia/SG1/2008	6928 nt	KF688606	Mackay et al. Unpublished.
RV-C50	rhinovirus C50 strain human/Australia/SG1/2008	953 nt (VP1)	JQ739202	Mackay et al. Unpublished.
RV-C51	rhinovirus C51 strain LZ508	7154 nt	JF317015	Yan et al. Unpublished.
RV-C51	rhinovirus C51 strain JAL-1	7155 nt	JX291115	Lednicky & Loeb. Unpublished.
RV-C52	rhinovirus C52 strain D1880-V1	1287 nt (VP1)	awaited	Zlateva et al. Unpublished.
RV-C53	rhinovirus C53 strain H1380-V1	1324 nt (VP1)	awaited	Zlateva et al. Unpublished.
RV-C54	rhinovirus C54 strain D3490	7054 nt	KP282614	Jazaeri et al. 2015. Identification of a Novel rhinovirus C Type by Antibody Capture VIDISCA-454. Viruses 7 (1):239-251.
RV-C55	rhinovirus C55 strain ID529T	3124 nt (5'UTR-2A)	KR997885	L'Huellier et al. 2015. Molecular Epidemiology of rhinoviruses and Enteroviruses Highlights Their Diversity in Sub-Saharan Africa. Viruses 7 (12):6412-6423.
RV-C56	rhinovirus C56 strain JPN/Kumamoto1/2009	2343 nt (P1par)	LC004772	Kuroda et al. 2015. Molecular evolution of the VP1, VP2, and VP3 genes in human rhinovirus species C. Sci Rep 5:8185.
RV-C57	rhinovirus C57 strain 7383-MY-10	7073 nt	KP890662	Khaw et al. 2016. Comparative Genetic Analyses of rhinovirus C (RV-C) Complete Genome from Malaysia. Front Microbiol 7:543.

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