EMCV-1

encephalomyocarditis virus 1 strain R[ueckert] (USA)

7835 nt

M81861

Duke et al. 1992. Sequence and structural elements that contribute to efficient encephalomyocarditis virus RNA translation. J. Virol. 66 (3), 1602-1609.

NC_001479

Duke et al. 1992. Sequence and structural elements that contribute to efficient encephalomyocarditis virus RNA translation. J. Virol. 66 (3), 1602-1609.

7200 nt

X00463

Palmenberg et al. 1984. The nucleotide and deduced amino acid sequences of the encephalomyocarditis viral polyprotein coding region. Nucleic Acids Res. 12 (6), 2969-2985.

encephalomyocarditis virus 1 strain ATCC VR-129B (chimpanzee/USA-Florida/1944)

7875 nt

KM269482

Logan et al. 2014. A universal protocol to generate consensus level genome sequences for foot-and-mouth disease virus and other positive-sense polyadenylated RNA viruses using the Illumina MiSeq. BMC Genomics 15 (1), 828.

encephalomyocarditis virus 1 strain MM (USA/1942)

7875 nt

KP892662

Shifflett et al. 2015, unpublished.

encephalomyocarditis virus 1 strain B, nondiabetogenic variant (pig/Panama/1958)

7825 nt

M22457 (J04335)

Bae et al. 1989. Genomic differences between the diabetogenic and nondiabetogenic variants of encephalomyocarditis virus. Virology 170 (1), 282-287.

encephalomyocarditis virus 1 strain D, diabetogenic variant (pig/Panama/1958)

7829 nt

M22458

Bae et al. 1989. Genomic differences between the diabetogenic and nondiabetogenic variants of encephalomyocarditis virus. Virology 170 (1), 282-287.

encephalomyocarditis virus 1 strain D, diabetogenic variant, ifp-phenotype (pig/Panama/1958)

7842 nt

M37588

Cohen et al. 1988. Comparison of the nucleotide sequences of diabetogenic and nondiabetogenic encephalomyocarditis virus. Virology 166 (2), 603-607.

encephalomyocarditis virus 1 strain PV2 (pig/Panama/1958)

7820 nt

X87335

Nelsen-Salz et al. 1996. Analysis of sequence and pathogenic properties of two variants of encephalomyocarditis virus differing in a single amino acid in VP1. Virus Res. 41 (2), 109-122.

encephalomyocarditis virus 1 strain emcv-pv21 (pig/Panama/1958)

7861 nt

X74312

Zimmermann et al. 1994. The complete nucleotide sequence and construction of an infectious cDNA clone of a highly virulent encephalomyocarditis virus. Virology 203 (2), 366-372.

mengovirus strain UR22-M (medium plaque) (Rhesus monkey/Uganda)

7761 nt

L22089

Palmenberg & Duke, 1993, unpublished.

mengovirus strain AnrB-3741 (tatera/Central African Republic/1983)

7548 nt

KU955338

Berthet et al. 2016, unpublished.

encephalomyocarditis virus 1 strain BEL-2887A/91 (pig/Belgium/1991)

7730 nt

AF356822

Kassimi et al. 2002. Nucleotide sequence and construction of an infectious cDNA clone of an EMCV strain isolated from aborted swine fetus. Virus Res. 83 (1-2), 71-87.

encephalomyocarditis virus 1 strain EMCV MN-30 (pig/USA/1987)

7678 nt

AY296731

LaRue et al. 2003. A Wild-Type Porcine Encephalomyocarditis Virus Containing a Short Poly(C) Tract Is Pathogenic to Mice, Pigs, and Cynomolgus Macaques. J. Virol. 77 (17), 9136-9146.

encephalomyocarditis virus 1 strain pEC9 (USA)

7722 nt

DQ288856

Martin et al. 2000. Mengovirus and encephalomyocarditis virus poly(C) tract lengths can affect virus growth in murine cell culture. J. Virol. 74 (7), 3074-3081.

encephalomyocarditis virus 1 strain Rz-pMwt (Uganda)

7722 nt

DQ294633

Fara-Hartley & Palmenberg. 2005. Dipyridamole reversibly inhibits mengovirus RNA replication. J. Virol. 79 (17), 11062-11070.

encephalomyocarditis virus 1 strain BJC3

7746 nt

DQ464062

Zhang et al. 2007. Genomic analysis of two porcine encephalomyocarditis virus strains isolated in China. Arch. Virol. 152 (6), 1209-1213.

encephalomyocarditis virus 1 strain HB1

7735 nt

DQ464063

Zhang et al. 2007. Genomic analysis of two porcine encephalomyocarditis virus strains isolated in China. Arch. Virol. 152 (6), 1209-1213.

encephalomyocarditis virus 1 strain EMCV-CBNU

7713 nt

DQ517424

Song et al. 2006, unpublished.

encephalomyocarditis virus 1 strain 1086C (rat/Belgium)

7340 nt

DQ835185

Guy et al. 2009. Efficient infection of buffalo rat liver-resistant cells by encephalomyocarditis virus requires binding to cell surface sialic acids. J. Gen. Virol. 90 (PT 1), 187-196.

encephalomyocarditis virus 1 strain K3 (pig/South Korea/1990)

7340 nt

EU780148

An et al. 2009. Encephalomyocarditis in Korea: serological survey in pigs and phylogenetic analysis of two historical isolates. Vet. Microbiol. 137 (1-2), 37-44.

encephalomyocarditis virus 1 strain K11 (pig/South Korea/1990)

7340 nt

EU780149

An et al. 2009. Encephalomyocarditis in Korea: serological survey in pigs and phylogenetic analysis of two historical isolates. Vet. Microbiol. 137 (1-2), 37-44.

encephalomyocarditis virus 1 strain GX0601 (China)

7729 nt

FJ604852

Zhao et al. 2009, unpublished.

encephalomyocarditis virus 1 strain GX0602 (China)

7725 nt

FJ604853

Zhao et al. 2009, unpublished.

encephalomyocarditis virus 1 strain GXLC (pig/China/2008)

7725 nt

FJ897755

Shi et al. 2009, unpublished.

encephalomyocarditis virus 1 strain NJ08 (pig/China/2008)

7725 nt

HM641897

Bai et al. 2012. Inhibition of encephalomyocarditis virus replication by shRNA targeting 1D and 3AB genes in vitro and in vivo. Virus Genes 44 (2), 183-190.

encephalomyocarditis virus 1 strain HB10 (pig/China/2008)

6879 nt

JQ864080

Lin et al. 2012. Isolation, molecular characterization, and phylogenetic analysis of porcine encephalomyocarditis virus strain HB10 in China. Infect. Genet. Evol. 12 (6), 1324-1327.

encephalomyocarditis virus 1 strain BD2 (pig/China)

7741 nt

KF709977

Yuan et al. 2013. Complete Genome Sequence of Porcine Encephalomyocarditis Virus Strain BD2. Genome Announc 1 (6), e01028-13.

6879 nt

KC762214

Yuan et al. 2014. Isolation and molecular analysis of porcine encephalomyocarditis virus strain BD2 from northern China. Infect. Genet. Evol. 21, 303-307.

encephalomyocarditis virus 1 strain FJ13 (tiger/China/2013)

7739 nt

KF293299

Liu et al. 2013. Complete nucleotide sequence of encephalomyocarditis virus isolated from South china tigers in china. Genome Announc 1 (4), e00651-13.

encephalomyocarditis virus 1 strain XX1 (pig/China/2012)

6849 nt

KF598860

Yan al. 2013, unpublished.

encephalomyocarditis virus 1 strain XX2 (pig/China/2012)

6863 nt

KF598861

Yan al. 2013, unpublished.

encephalomyocarditis virus 1 strain XX3 (pig/China/2012)

6863 nt

KF598862

Yan al. 2013, unpublished.

encephalomyocarditis virus 1 strain JX (pig/China/2012)

6849 nt

KF598863

Yan al. 2013, unpublished.

encephalomyocarditis virus 1 strain ZM (pig/China/2012)

6861 nt

KF598864

Yan al. 2013, unpublished.

encephalomyocarditis virus 1 strain HN13 (pig/China/2013)

7725 nt

KF771002

Chang al. 2014. Complete genome sequence of porcine encephalomyocarditis virus from an aardvark in china. Genome Announc 2 (1), e00017-14.

encephalomyocarditis virus 1 strain HNJZ1201 (pig/China/2012)

7735 nt

KF836386

Chang al. 2013, unpublished.

encephalomyocarditis virus 1 strain JZ1202 (domesticated boar/China/2012)

7735 nt

KF836387

Chang al. 2013, unpublished.

encephalomyocarditis virus 1 strain JZ1203 (mouse/China/2012)

7725 nt

KF836388

Chang al. 2013, unpublished.

encephalomyocarditis virus 1 strain YM13 (pig/China/2013)

7729 nt

KF836389

Chang al. 2013, unpublished.

encephalomyocarditis virus 1 strain YY13 (pig/China/2013)

7724 nt

KF836390

Chang al. 2013, unpublished.

encephalomyocarditis virus 1 strain GS01 (pig/China/2013)

7717 nt

KJ524643

Feng al. 2014, unpublished.

encephalomyocarditis virus 1 strain Sing-M100-02 (orangutan/Singapore/2002, lungs)

7630 nt

KC310737

Yeo al. 2013. A highly divergent Encephalomyocarditis virus isolated from nonhuman primates in Singapore. Virol. J. 10 (1), 248.

encephalomyocarditis virus 1 strain Sing-M105-02 (orangutan/Singapore/2002, heart)

7634 nt

KC310738

Yeo al. 2013. A highly divergent Encephalomyocarditis virus isolated from nonhuman primates in Singapore. Virol. J. 10 (1), 248.

EMCV-2

encephalomyocarditis virus 2 strain RD 1338 (D28/05) (Apodemus sylvaticus/Germany/2005)

7606 nt

JX257003

Philipps et al. 2012. Isolation and molecular characterization of a second serotype of the encephalomyocarditis virus. Vet. Microbiol. 161 (1-2), 49-57.

TMEV,
CaV-B1

Theiler's encephalomyelitis virus (TMEV) strain GD VII (USA/1937)

8101 nt

X56019

Law & Brown. 1990. The complete nucleotide sequence of the GDVII strain of Theiler's murine encephalomyelitis virus (TMEV). Nucleic Acids Res. 18 (22), 6707-6708.

NC_001366

Law & Brown. 1990. The complete nucleotide sequence of the GDVII strain of Theiler's murine encephalomyelitis virus (TMEV). Nucleic Acids Res. 18 (22), 6707-6708.

8105 nt

M20562

Pevear et al. 1988. Insights into Theiler's virus neurovirulence based on a genomic comparison of the neurovirulent GDVII and less virulent BeAn strains. Virology 165 (1), 1-12.

Theiler's encephalomyelitis virus strain DA (mouse/USA/1952)

8120 nt

JX443418

Sorgeloos et al. 2013. Evasion of Antiviral Innate Immunity by Theiler's Virus L* Protein through Direct Inhibition of RNase L. PLoS Pathog. 9 (6), E1003474.

Theiler's encephalomyelitis virus strain DA subgroup TO (mouse/USA/1952)

8093 nt

M20301

Ohara et al. 1988. Molecular cloning and sequence determination of DA strain of Theiler's murine encephalomyelitis viruses. Virology 164 (1), 245-255.

Theiler's encephalomyelitis virus strain DA3d-e (derived from DA strain)

8094 nt

KF680264

H. Lipton, 2013, unpublished.

Theiler's encephalomyelitis virus strain BeAn 8386 (Brazil/1957)

8098 nt

M16020

Pevear et al. 1987. Analysis of the complete nucleotide sequence of the picornavirus Theiler's murine encephalomyelitis virus indicates that it is closely related to cardioviruses. J. Virol. 61 (5), 1507-1516.

Theiler's encephalomyelitis virus strain S2 (variant of BeAn 8386)

8021 nt

DQ401688

Myoung et al. 2007. The immunodominant CD8+ T cell epitope region of Theiler's virus in resistant C57BL/6 mice is critical for anti-viral immune responses, viral persistence, and binding to the host cells. Virology 360 (1), 159-171.

Theiler's encephalomyelitis virus strain TO4 (B15) (USA/1937)

8100 nt

EU718732

Liang et al. 2008. Phylogenetic analysis of the species Theilovirus: emerging murine and human pathogens. J. Virol. 82 (23), 11545-11554.

Theiler's encephalomyelitis virus strain TO Yale (USA/1943)

8096 nt

EU723238

Liang et al. 2008. Phylogenetic analysis of the species Theilovirus: emerging murine and human pathogens. J. Virol. 82 (23), 11545-11554.

Theiler's encephalomyelitis virus strain Vie415HTR (USA)

8100 nt

EU718733

Liang et al. 2008. Phylogenetic analysis of the species Theilovirus: emerging murine and human pathogens. J. Virol. 82 (23), 11545-11554.

Theiler's encephalomyelitis virus strain NIHE (Viet Nam/2007)

8102 nt

HQ652539

Buckwalter et al. 2011. Identification of a novel neuropathogenic Theiler's murine encephalomyelitis virus. J. Virol. 85, 6893-6905.

Sikhote-Alin virus 1 strain P-113 (wild boar - Ixodes persulcatus ticks/Russia/1970)

7998 nt

KJ191558

Alkhovsky al. 2014, unpublished.

VHEV,
CaV-B2

Vilyuisk human encephalomyelitis virus (VHEV) strain V1 (human/Russia-Siberia/1955)

966 nt (5'UTR)

M80888

Pritchard et al. 1992. A single base deletion in the 5' noncoding region of Theiler's virus attenuates neurovirulence. J. Virol. 66 (4), 1951-1958.

2790 nt< (L-P1)

M94868

Pritchard et al. 1992. A single base deletion in the 5' noncoding region of Theiler's virus attenuates neurovirulence. J. Virol. 66 (4), 1951-1958.

4286 nt (P2-P3-3'UTR)

EU723237

Liang et al. 2008. Phylogenetic analysis of the species Theilovirus: emerging murine and human pathogens JOURNAL J. Virol. 82 (23), 11545-11554.

CaV-B3

rodent cardiovirus strain Rattus rattus/China/2014

8122 nt

MF172923

Wang et al. 2018. A novel cardiovirus in wild rats. Virol. J. 15, 58.

TRV,
CaV-B4

Theravirus (Theiler's like virus of rats) strain NGS910

8021 nt

AB090161

Ohsawa et al. 2003. Genetic analysis of a Theiler-like virus isolated from rats. Comp. Med. 53, 191-196.

Theravirus (Theiler's like virus of rats) strain RTV-1 (rat/USA)

8094 nt

EU542581

Drake et al. 2008. Differential susceptibility of SD and CD rats to a novel rat theilovirus. Comp. Med. 58 (5), 458-464.

Theravirus (Theiler's like virus of rats) strain RTV1 (rat/USA/2006)

7996 nt

EU815052

Dole et al. 2008, unpublished.

CaV-B5

mouse cardiovirus strain TMEV/NYC/Manhattan/poolF4

7986 nt

MF416403

Willams et al. 2018. Viral diversity of house mice in New York City. mBio 9, e01354-17.

CaV-C1,
BCV-1

Boone cardiovirus strain BCV-1 (rat/USA/2010)

8530 nt

JQ864242

Gohndrone & Riley. 2012, unpublished.

CaV-C2,
BCV-2

Boone cardiovirus strain BCV-2 (rat/USA/2012)

6057 nt

JX683808

Gohndrone & Riley. 2012, unpublished.

CaV-C3

cardiovirus C3 strain Wencheng-Rn416

8417 nt

MF352424

W.-P. Guo & Y.-Z. Zhang. 2017, unpublished.

SAFV-1

Saffoldvirus 1 (SAFV-1) strain (USA-California/1981)

8115 nt

EF165067

Jones et al. 2007. Discovery of a novel human picornavirus in a stool sample from a pediatric patient presenting with Fever of unknown origin. J. Clin. Microbiol. 45 (7), 2144-2150.

NC_009448

Jones et al. 2007. Discovery of a novel human picornavirus in a stool sample from a pediatric patient presenting with Fever of unknown origin. J. Clin. Microbiol. 45 (7), 2144-2150.

SAFV-1 strain Pak-3097 (human/Pakistan/2009)

8078 nt

AB747248

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-1 strain GL365 (human/China/2007)

7865 nt

JX122399

Ren et al. 2013. Multiple genomic recombination events in the evolution of saffold cardiovirus. PLoS ONE 8 (9), E74947.

SAFV-1 strain GL352 (human/China/2007)

7868 nt

JX122400

Ren et al. 2013. Multiple genomic recombination events in the evolution of saffold cardiovirus. PLoS ONE 8 (9), E74947.

SAFV-1 strain GL368 (human/China/2007)

7867 nt

JX122401

Ren et al. 2013. Multiple genomic recombination events in the evolution of saffold cardiovirus. PLoS ONE 8 (9), E74947.

SAFV-1 strain GL362 (human/China/2007)

7851 nt

JX122402

Ren et al. 2013. Multiple genomic recombination events in the evolution of saffold cardiovirus. PLoS ONE 8 (9), E74947.

SAFV-1 strain GL371 (human/China/2007)

7856 nt

JX122403

Ren et al. 2013. Multiple genomic recombination events in the evolution of saffold cardiovirus. PLoS ONE 8 (9), E74947.

SAFV-2

SAFV-2 strain UC1

7961 nt

EU376394

Chiu et al. 2008. Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections. Proc. Natl. Acad. Sci. U.S.A. 105 (37), 14124-14129.

NC_010810

Chiu et al. 2008. Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections. Proc. Natl. Acad. Sci. U.S.A. 105 (37), 14124-14129.

SAFV-2 strain Finland 2008 (human/Finland/2008)

8046 nt

FR682076

Zoll et al. 2010, unpublished.

SAFV-2 strain Pak-2491 (human/Pakistan/2009)

8075 nt

AB747249

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-2 strain Can112051-06 (human/Canada/2006)

6882 nt

AM922293

Abed & Boivin. 2008. New Saffold cardioviruses in 3 children, Canada. Emerging Infect. Dis. 14 (5), 834-836.

SAFV-2 strain Can112051-06 adapted

8085 nt

JF813004

Hertzler et al. 2011. Adaptation of saffold virus 2 for high-titer growth in mammalian cells. J. Virol. 85 (14), 7411-7418.

SAFV-2 strain QCW (human/Australia/2011)

7781 nt

JX163901

Wang et al. 2012, unpublished.

SAFV-2 strain S4 (human/USA/2005)

7885 nt

JN652231

Jones & Tirado. 2011, unpublished.

SAFV-2 strain S14 (human/USA/2005)

7887 nt

JN652232

Jones & Tirado. 2011, unpublished.

SAFV-2 strain S19 (human/USA/2005)

7886 nt

JN652233

Jones & Tirado. 2011, unpublished.

SAFV-2 strain Nijmegen2008 (human/Netherlands/2008)

8045 nt

FN999911

Zoll et al. 2010, unpublished.

SAFV-2 strain HTCV-UC6 (human/USA/2001)

8047 nt

GU595289

Chiu et al. 2010. Cultivation and serological characterization of a human Theiler's-like cardiovirus associated with diarrheal disease. J. Virol. 84 (9), 4407-4414.

SAFV-2 strain BCHU79 (human/China/2009)

7846 nt

GU943518

Wang et al. 2010, unpublished.

SAFV-2 strain BR/118/2006 (human/Brazil/2006)

7809 nt

EU681177

Drexler et al. 2008. Circulation of 3 lineages of a novel Saffold cardiovirus in humans. Emerging Infect. Dis. 14 (9), 1398-1405.

SAFV-2 strain D/VI2229/2004 (human/Germany/2004)

7842 nt

EU681176

Drexler et al. 2008. Circulation of 3 lineages of a novel Saffold cardiovirus in humans. Emerging Infect. Dis. 14 (9), 1398-1405.

SAFV-3

SAFV-3 strain NL1999-590 (human/Netherlands/1998)

7984 nt

HM181996

Svraka et al. 2010. Metagenomic sequencing for virus identification in a public-health setting. J. Gen. Virol. 91 (PT 11), 2846-2856.

SAFV-3 strain NL2007-2686 (human/Netherlands/2004)

7989 nt

HM181997

Svraka et al. 2010. Metagenomic sequencing for virus identification in a public-health setting. J. Gen. Virol. 91 (PT 11), 2846-2856.

SAFV-3 strain NL2007-2690 (human/Netherlands/2004)

7991 nt

HM181998

Svraka et al. 2010. Metagenomic sequencing for virus identification in a public-health setting. J. Gen. Virol. 91 (PT 11), 2846-2856.

SAFV-3 strain NL2005-1035 (human/Netherlands/2005)

7991 nt

HM181999

Svraka et al. 2010. Metagenomic sequencing for virus identification in a public-health setting. J. Gen. Virol. 91 (PT 11), 2846-2856.

SAFV-3 strain Nijmegen2007 (human/Netherlands/2007)

8051 nt

FM207487

Zoll et al. 2009. Saffold virus, a human Theiler's-like cardiovirus, is ubiquitous and causes infection early in life. PLoS Pathog. 5 (5), E1000416.

SAFV-3 strain Pak-3641 (human/Pakistan/2009)

8085 nt

AB747250

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-3 strain Gunma/176/2008 (human/Japan/2008)

8079 nt

AB983594

Kotani et al. 2014, unpublished.

SAFV-3 strain JPN08-404 (human/Japan/2008)

8082 nt

HQ902242

Hosomi et al. 2011, unpublished.

SAFV-3 strain JPN08-404 mouse-adapted

8082 nt

AB983595

Kotani et al. 2014, unpublished.

SAFV-3 strain SAFV-3-Maynas-Loreto-Peru-2012 (human/Peru/2012)

8064 nt

KP972594

Leguia et al. 2015. Full Genomic Characterization of a Saffold Virus Isolated in Peru. Pathogens 4 (4), 816-825.

SAFV-3 strain BCH1031 (human/China/2008)

8054 nt

GU943513

Wang et al. 2010, unpublished.

SAFV-3 strain BCH115 (human/China/2009)

8054 nt

GU943514

Wang et al. 2010, unpublished.

SAFV-3 strain Penang (human/Malaysia/2009)

8073 nt

HQ162476

Chua et al. 2011. Saffold virus infection in children, Malaysia, 2009. Emerging Infect. Dis. 17 (8), 1562-1564.

SAFV-3 strain D/VI2273/2004 (human/Germany/2004)

7846 nt

EU681178

Drexler et al. 2008. Circulation of 3 lineages of a novel Saffold cardiovirus in humans. Emerging Infect. Dis. 14 (9), 1398-1405.

SAFV-3 strain D/VI2223/2004 (human/Germany/2004)

7846 nt

EU681179

Drexler et al. 2008. Circulation of 3 lineages of a novel Saffold cardiovirus in humans. Emerging Infect. Dis. 14 (9), 1398-1405.

SAFV-4

SAFV-4 strain Pak-3164 (human/Pakistan/2009)

8027 nt

AB747251

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-5

SAFV-5 strain Pak5003 (human/Pakistan/2007)

7627 nt

FJ463615

Blinkova et al. 2009. Cardioviruses are genetically diverse and cause common enteric infections in South Asian children. J. Virol. 83 (9), 4631-4641.

SAFV-5 strain Pak5152 (human/Pakistan/2007)

7639 nt

FJ463616

Blinkova et al. 2009. Cardioviruses are genetically diverse and cause common enteric infections in South Asian children. J. Virol. 83 (9), 4631-4641.

SAFV-5 strain Pak-3290 (human/Pakistan/2009)

8083 nt

AB747252

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-6

SAFV-6 strain Pak6572 (human/Pakistan/2007)

7410 nt

FJ463617

Blinkova et al. 2009. Cardioviruses are genetically diverse and cause common enteric infections in South Asian children. J. Virol. 83 (9), 4631-4641.

SAFV-6 strain Pak-1570 (human/Pakistan/2009)

8084 nt

AB747253

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-7

SAFV-7 strain Pak-2106 (human/Pakistan/2009)

8087 nt

AB747254

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-8

SAFV-8 strain Pak-3486 (human/Pakistan/2009)

8081 nt

AB747255

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-9

SAFV-9 strain Pak-2457 (human/Pakistan/2009)

8081 nt

AB747256

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-10

SAFV-10 strain Pak-2325 (human/Pakistan/2009)

8083 nt

AB747257

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

SAFV-11

SAFV-11 strain Pak-2338 (human/Pakistan/2009)

8079 nt

AB747258

Naeem et al. 2014. Genetic diversity of circulating Saffold viruses in Pakistan and Afghanistan. J. Gen. Virol. 95 (PT 9), 1945-1957.

CaV-E1

red-backed vole cardiovirus strain RtMrut-PicoV/JL2014-1

8122 nt

KY432928

Wu et al. 2018. Comparative analysis of rodent and small mammal viromes to better understand the wildlife origin of emerging infectious diseases. Microbiome 6 (1), 178.

CaV-F1

grey-backed vole cardiovirus strain RtMruf-PicoV/JL2014-1

7890 nt

KY432930

Wu et al. 2018. Comparative analysis of rodent and small mammal viromes to better understand the wildlife origin of emerging infectious diseases. Microbiome 6 (1), 178.

genet fecal theilovirus strain S15 (Genetta genetta/Spain/2012)

6488 nt
(5'UTR-3D_par)

KF823815

Bodewes et al. 2014. Viral metagenomic analysis of feces of wild small carnivores. Virol. J. 11 (1), 89.

marmot cardiovirus strain HT7

6253 nt
(VP2_par-3'UTR)

KY855434

Luo et al. 2018. Marmota himalayana in the Qinghai-Tibetain plateau as a special host for bi-segmented and unsegmented picobirnaviruses. Emerg. Microbes Infect. 7 (1), 20.