Jena Picornavirus Page - Limnipivirus

Genus Limnipivirus

Genus Limnipivirus presently comprises 4 species:

Limnipivirus A, 1 type

Limnipivirus B, 1 type

Limnipivirus C, 1 type

Limnipivirus D, 1 type

Genome layout:
Limnipivirus A, Limnipivirus B, Limnipivirus C:
VPg-5'UTR^IRES-IV[1AB-1C-1D-2A1^npgp/2A2^npgp/2A3-2B-2C^hel/3A-3B ^VPg-3C^pro-3D^pol]3'UTR-poly(A)
Limnipivirus D:
VPg-5'UTR^IRES-IV[1AB-1C-1D-2A1^npgp/2A2^npgp/2A3^npgp/2A4^H-box/NC- 2B-2C^hel/3A-3B^VPg-3C^pro-3D^pol]3'UTR-poly(A)

There are 36 GenBank entries (as of 2 December 2020) !

Species	Type	Strain	Length	Acc. No.	Reference
*Limnipivirus A*	LiV-A1	limnipivirus A1 [bluegill picornavirus (BGPV)] strain 04-032	8050 nt	JX134222	Barbknecht et al. 2014. Characterization of a new picornavirus isolated from the freshwater fish Lepomis macrochirus. J Gen Virol 95(3):601-613.
*Limnipivirus A*	LiV-A1		8050 nt	NC_018506	Barbknecht et al. 2014. Characterization of a new picornavirus isolated from the freshwater fish Lepomis macrochirus. J Gen Virol 95(3):601-613.
*Limnipivirus B*	LiV-A1	limnipivirus A1 [carp picornavirus (CPV)] strain F37/06	7697 nt	KF306267	Lange et al. 2014. Virus isolate from carp: genetic characterisation reveals a novel picornavirus with two aphthovirus 2A-like sequences. J Gen Virol 95(1):80-90.
*Limnipivirus B*	LiV-A1	limnipivirus A1 [carp picornavirus (CPV)] strain F37/06	7697 nt	NC_023162	Lange et al. 2014. Virus isolate from carp: genetic characterisation reveals a novel picornavirus with two aphthovirus 2A-like sequences. J Gen Virol 95(1):80-90.
*Limnipivirus C*	LiV-C1	limnipivirus C1 [fathead minnow picornavirus (FHMPV)] strain 09-283	7934 nt	KC465953	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1		7934 nt	NC_023437	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain FHMPV-1	7746 nt	KF183915	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain FHMPV-2	7746 nt	KF183916	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain FHMPV-3	1544 nt (3D^pol)	KF183909	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain FHMPV-4	1544 nt (3D^pol)	KF183910	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain FHMPV-5	1544 nt (3D^pol)	KF183911	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain FHMPV-6	1544 nt (3D^pol)	KF183912	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain FHMPV-7	1544 nt (3D^pol)	KF183913	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain FHMPV-8	1544 nt (3D^pol)	KF183914	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain GW2 06-169.2	2047 nt	KF824535	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain GW8 06-169.8	2047 nt	KF824536	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain GW9 06-169.9	2047 nt	KF824537	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain DC1 10-02.1	2047 nt	KF824538	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain DC2 10-02.2	2047 nt	KF824539	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain Comp 10-207	2047 nt	KF824540	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain Bison 11-230.5	2047 nt	KF824541	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain And4 11-224.4	2047 nt	KF824542	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain And5 11-224.5	2047 nt	KF824543	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain And9 11-224.9	2047 nt	KF824544	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain GW2 06-169.2	1911 nt	KF824545	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain GW8 06-169.8	1911 nt	KF824546	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain GW9 06-169.9	1911 nt	KF824547	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain DC1 10-02.1	1911 nt	KF824548	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain DC2 10-02.2	1911 nt	KF824549	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain Comp 10-207	1911 nt	KF824550	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain Bison 11-230.5	1911 nt	KF824551	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain And4 11-224.4	1911 nt	KF824552	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain And5 11-224.5	1911 nt	KF824553	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	strain And9 11-224.9	1911 nt	KF824554	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
	LiV-C1	fathead minnow picornavirus strain 20	7772 nt	KF874490	Phelps et al. 2014. Isolation and molecular characterization of a novel picornavirus from baitfish in the USA. PLoS ONE 9(2):e87593.
*Limnipivirus D*	LiV-D1	limnipivirus D1 [Guangdong spotted longbarbel catfish picornavirus] strain GDDSYC43605	8050 nt	JX134222	Shi et al. 2018. The evolutionary history of vertebrate RNA viruses. Nature 556:197-202.

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