Genus Sicinivirus

Genus Sicinivirus presently comprises 1 species, Sicinivirus A, with 8 types.

Genome layout: VPg-5'UTRIRES-II[L-1AB-1C-1D/2AH-box/NC-2B-2Chel/3A-3BVPg- 3Cpro-3Dpol]3'UTR-poly(A)

This compilation is not comprehensive. There are 31 GenBank entries (as of 22 June 2019) !

Species

Type

Strain

Length

Acc. No.

Reference

Sicinivirus A

SiV-A1

sicinivirus A1
strain UCC001 (chicken/Ireland)

9276 nt

KF741227

Bullman et al. 2014. Identification and genetic characterization of a novel picornavirus from chickens. J Gen Virol 95(5):1094-1103.

9276 nt

NC_023861

Bullman et al. 2014. Identification and genetic characterization of a novel picornavirus from chickens. J Gen Virol 95(5):1094-1103.

SiV-A1

sicinivirus A1
strain UCC1 (chicken/Ireland/2012)
Cave! Sequence has many errors.

8334 nt

KF366619

Bullman et al., unpublished.

SiV-A1

sicinivirus A1
strain Pf-CHK1/SiV (chicken/Hungary/2013)

9883 nt

KT880665

Boros et al. 2012. A diarrheic chicken simultaneously co-infected with multiple picornaviruses: Complete genome analysis of avian picornaviruses representing up to six genera. Virology 489:63-74.

SiV-A1

sicinivirus A1
strain RS/BR/2015/5R (chicken/Brazil/2015)

9874 nt

MG846487

D.A. Lima & P.M. Roehe, unpublished.

SiV-A2

sicinivirus A2
strain JSY (chicken/China)

9809 nt

KP779642

Zhou et al. 2015. Identification and Genome Characterization of the First Sicinivirus Isolate from Chickens in Mainland China by Using Viral Metagenomics. PLoS ONE 10(10):e0139668.

9809 nt

NC_028380

Zhou et al. 2015. Identification and Genome Characterization of the First Sicinivirus Isolate from Chickens in Mainland China by Using Viral Metagenomics. PLoS ONE 10(10):e0139668.

SiV-A3

sicinivirus A3
strain chicken picornavirus 1
strain 55C (chicken/Hong Kong/2008)

8287 nt

KF979331

Lau et al. 2014. Chickens host diverse picornaviruses originated from potential interspecies transmission with recombination. J Gen Virol 95(9):1929-1944.

SiV-A3

sicinivirus A3
strain RS/Brazil/2015/2

9128 nt

KY069113

Lima et al. 2016, unpublished.

SiV-A3

sicinivirus A3
strain RS/BR/2015/4S (chicken/Brazil/2015)

9547 nt

MG846485

D.A. Lima & P.M. Roehe, unpublished.

SiV-A3

sicinivirus A3
strain RS/BR/2015/5S (chicken/Brazil/2015)

9711 nt

MG846486

D.A. Lima & P.M. Roehe, unpublished.

SiV-A4

sicinivirus A4
strain chicken picornavirus 1
strain 100C (Hong Kong/2009)

8331 nt

KF979332

Lau SK, Woo PC, Yip CC, Li KS, Fan RY, Bai R, Huang Y, Chan KH, Yuen KY. 2014. Chickens host diverse picornaviruses originated from potential interspecies transmission with recombination. J. Gen. Virol. 95, 1929-1944.

SiV-A5

sicinivirus A5
strain RS/Brazil/2015/1

9253 nt

KY069112

Lima et al. 2016, unpublished.

SiV-A5

sicinivirus A5
strain RS/BR/2015/1R-1 (chicken/Brazil/2015)

9270 nt

MG846483

D.A. Lima & P.M. Roehe, unpublished.

SiV-A6

sicinivirus A6
strain RS/BR/2015/4R (chicken/Brazil/2015)

9075 nt

MG846481

D.A. Lima & P.M. Roehe, unpublished.

SiV-A7

sicinivirus A7
strain RS/BR/2015/2S-1 (chicken/Brazil/2015)

8710 nt

MG846480

D.A. Lima & P.M. Roehe, unpublished.

SiV-A7

sicinivirus A7
strain RS/BR/2015/7S (chicken/Brazil/2015)

9471 nt

MG846484

D.A. Lima & P.M. Roehe, unpublished.

SiV-A8

sicinivirus A8
strain RS/BR/2015/3R (chicken/Brazil/2015)

9240 nt

MG846482

D.A. Lima & P.M. Roehe, unpublished.

SiV-A8

sicinivirus A8
strain RS/BR/2015/3S-1 (chicken/Brazil/2015)

4486 nt

MG846479

D.A. Lima & P.M. Roehe, unpublished.

unassigned

strain SiV 10

2557 nt

KX100567

Morgan et al., unpublished.




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